Evidence map›Paper›PMID 17302827›Full record

ArticleMolecular microbiology2007

Specificity determinants of conjugative DNA processing in the Enterococcus faecalis plasmid pCF10 and the Lactococcus lactis plasmid pRS01.

Yuqing Chen, Jack H Staddon, Gary M Dunny

Open access · greenAbstract read
In one paragraph

Article in Molecular microbiology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
0.9field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 56 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. VanA-Enterococcus faecalis in Poland: hospital population clonal structure and vanA mobilome.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2022
    Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Enterococcal Genetics.Microbiology spectrum · 2019
    Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. TheFrontiers in microbiology · 2017
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Yuqing ChenDepartment of Microbiology, University of Minnesota Medical School, Minneapolis, MN 55455, USA.
Jack H Staddon
Gary M Dunny
University of Minnesota Medical Center · US

Funding

GENETIC FUNCTIONS OF CONJUGATIVE STREPTOCOCCAL R FACTORR01GM049530 · NIGMS · UNIVERSITY OF MINNESOTA TWIN CITIES · PI DUNNY, GARY M · 1992 to 2014
$3.6M
NIGMS NIH HHS GM49530NIGMS NIH HHS R01 GM049530
6 · The paper itself

Abstract

The DNA-processing region of the Enterococcus faecalis pheromone-responsive plasmid pCF10 is highly similar to that of the otherwise unrelated plasmid pRS01 from Lactococcus lactis. A transfer-proficient pRS01 derivative was unable to mobilize plasmids containing the pCF10 origin of transfer, oriT. In contrast, pRS01 oriT-containing plasmids could be mobilized by pCF10 at a low frequency. Relaxases PcfG and LtrB were both capable of binding to single-stranded oriT DNAs; LtrB was highly specific for its cognate oriT, whereas PcfG could recognize both pCF10 and pRS01 oriT. However, pcfG was unable to complement an ltrB insertion mutation. Genetic analysis showed that pcfF of pCF10 and ltrF of pRS01 are also essential for plasmid transfer. Purified PcfF and LtrF possess double-stranded DNA binding activities for the inverted repeat within either oriT sequence. PcfG and LtrB were recruited into their cognate F-oriT DNA complex through direct interactions with their cognate accessory protein. PcfG also could interact with LtrF when pCF10 oriT was present. In vivo cross-complementation analysis showed that ltrF partially restored the pCF10DeltapcfF mutant transfer ability when provided in trans, whereas pcfF failed to complement an ltrF mutation. Specificity of conjugative DNA processing in these plasmids involves both DNA-protein and protein-protein interactions.

Indexed as

Conjugation, GeneticBacterial ProteinsDNA, BacterialDNA, Single-StrandedDNA Transposable ElementsElectrophoretic Mobility Shift AssayEnterococcus faecalisGene DeletionGenetic Complementation TestLactococcus lactisMolecular Sequence DataMutagenesis, InsertionalPlasmidsProtein BindingRepetitive Sequences, Nucleic AcidReplication OriginBacterial ProteinsDNA, BacterialDNA, Single-StrandedDNA Transposable ElementsLtrB protein, Lactococcus lactis

Identifiers

PMID17302827
PMCPMC2650854
OpenAlexW2156843961

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.