ArticleJournal of virology2007
Detection and genetic characterization of group A rotavirus strains circulating among children with acute gastroenteritis in Japan.
Article in Journal of virology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.
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Who cites it
17 citing papers in PubMed.
- Review
- Distribution of group aIranian journal of microbiology · 2023Article
- Detection and full-genotype determination of rare and reassortant rotavirus A strains in Nizhny Novgorod in the European part of Russia.Archives of virology · 2023Article
- Rotavirus A in Domestic Pigs and Wild Boars: High Genetic Diversity and Interspecies Transmission.Viruses · 2022Article
- Genetic Characterizations and Molecular Evolution of VP7 Gene in Human Group A Rotavirus G1.Viruses · 2020Article
- Molecular epidemiology and surveillance of circulating rotavirus among children with gastroenteritis in Bangladesh during 2014-2019.PloS one · 2020Article
- Prevalence and genotypes of group A rotavirus among outpatient children under five years old with diarrhea in Beijing, China, 2011-2016.BMC infectious diseases · 2018Article
- Prevalence and genotypes of Rotavirus among children under 5 years presenting with diarrhoea in Moshi, Tanzania: a hospital based cross sectional study.BMC research notes · 2017Article
- Molecular Analysis of VP7 Gene of Rotavirus G1 Strains Isolated from North India.Current microbiology · 2016Article
- Evaluating the Impact of Breastfeeding on Rotavirus Antigenemia and Disease Severity in Indian Children.PloS one · 2016Article
- Phylogenetic analysis of a G6P[5] bovine rotavirus strain isolated in a neonatal diarrhea outbreak in a beef cattle herd vaccinated with G6P[1] and G10P[11] genotypes.Archives of virology · 2015Article
- Epidemiology and genetic diversity of rotavirus strains in children with acute gastroenteritis in Lahore, Pakistan.PloS one · 2013Article
- Genotyping rotavirus RNA from archived rotavirus-positive rapid test strips.Emerging infectious diseases · 2011Article
- Simian rotaviruses possess divergent gene constellations that originated from interspecies transmission and reassortment.Journal of virology · 2010Article
- Evidence of intragenic recombination in G1 rotavirus VP7 genes.Journal of virology · 2007Article
- Rotavirus vaccine and health-care utilization for rotavirus gastroenteritis in Tsu City, Japan.Western Pacific surveillance and response journal : WPSARArticle
- Diversity of group A rotavirus genes detected in the Triângulo Mineiro region, Minas Gerais, Brazil.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology]Article
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Authors and funding
8 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
A total of 603 fecal specimens collected from July 2005 to June 2006 from children with acute gastroenteritis, encompassing five different localities in Japan, were screened for group A rotavirus by reverse transcription-PCR. It was found that 117 fecal specimens (19.4%) were positive for group A rotavirus. Rotavirus infection was detected continuously from November to June, with the highest prevalence in April. The G (VP7 genotypes) and P (VP4 genotypes) types were further investigated. The predominant genotype was G1P[8] (70.1%), followed by G3P[8] (17.9%), G9P[8] (6.8%), and G2P[4] (2.6%). A number of unusual G1P[4] combinations were also detected during this study period. A novel nomenclature for G1 is proposed, in which worldwide rotavirus G1 strains are classified into 11 lineages with 17 sublineages. A wide range of amino acid substitutions (up to 34) in VP7 that are specific for G1 lineages and sublineages were identified. Interestingly, only short amino acid motifs located at positions 29 to 75 and 211 to 213 of VP7 defined correctly the phylogenetic G1 lineages and sublineages. Examination of the deduced sequences of antigenic regions of VP7 also revealed multiple particular amino acid substitutions that correlated with the phylogenetic G1 lineages and sublineages. Of note, at least three distinct clusters of rotavirus G1 isolates were cocirculating in the Japanese pediatric population studied.
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