Evidence map›Paper›PMID 17300515›Full record

ArticleThe Journal of eukaryotic microbiology

Transcriptional analysis of three major putative phosphatidylinositol kinase genes in a parasitic protozoan, Giardia lamblia.

Yunuen Hernandez, Gus Zamora, Suparna Ray, Jaime Chapoy, Edna Chavez, Robert Valvarde, Ebonye Williams, Stephen B Aley, Siddhartha Das

Abstract read
In one paragraph

Article in The Journal of eukaryotic microbiology. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.4field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Yunuen HernandezInfectious Diseases and Immunology Unit, The Border Biomedical Research Center (BBRC), and Department of Biological Sciences, University of Texas at El Paso, El Paso, Texas 79968-0519, USA.
Gus Zamora
Suparna Ray
Jaime Chapoy
Edna Chavez
Robert Valvarde
Ebonye Williams
Stephen B Aley
Siddhartha Das
The University of Texas at El Paso · USEl Paso Community College · US

Funding

TOXICOLOGY PROJECTG12RR008124 · NCRR · UNIVERSITY OF TEXAS EL PASO · PI WALSH, ELIZABETH J · 1992 to 2011
$20.8M
UTEP SCORE InstrumentationS06GM008012 · NIGMS · UNIVERSITY OF TEXAS EL PASO · PI DAS, SIDDHARTHA · 1989 to 2010
$15.8M
Sphingolipid and Mechanism of Cyst Formation by GiardiaR01AI095667 · NIAID · UNIVERSITY OF TEXAS EL PASO · PI DAS, SIDDHARTHA · 2011 to 2015
$2.1M
NCRR NIH HHS 5G112RR08124-09NCRR NIH HHS G12 RR008124NIAID NIH HHS R01 AI095667NIGMS NIH HHS 2R25GM 06042NIGMS NIH HHS S06 GM008012NIGMS NIH HHS S06 GM 008012-34
6 · The paper itself

Abstract

The current investigation evaluates the expression of phosphatidylinositol kinase (PIK) genes in the parasitic protozoan, Giardia lamblia. The G. lamblia Genome Database revealed the presence of two putative phosphatidylinositol-3-kinase (gPI3K) and one phosphatidylinositol-4-kinase (gPI4K) genes resembling the catalytic subunit of eukaryotic PIKs. Primers, designed to amplify mRNA of these three genes, were used to measure transcription by quantitative reverse-transcriptase polymerase chain reactions. Results suggest that all three PIK genes are expressed in non-encysting and encysting trophozoites. The relative levels of the mRNA were highest in parasites cultured in pre-encysting medium that contained no bile. Two inhibitors of PI3K, LY 294002 and wortmannin were found to inhibit the growth of the trophozoite in culture. However, wortmannin was more effective than LY294002. Altogether, the present study indicates that Giardia is capable of expressing PIKs that are necessary for the growth and differentiation of this pathogen.

Indexed as

1-Phosphatidylinositol 4-KinaseAndrostadienesAnimalsChromonesGenes, ProtozoanGiardia lambliaMorpholinesPhosphatidylinositol 3-KinasesPhosphodiesterase InhibitorsRNA, MessengerTranscription, GeneticTrophozoitesWortmannin1-Phosphatidylinositol 4-Kinase2-(4-morpholinyl)-8-phenyl-4H-1-benzopyran-4-oneAndrostadienesChromonesMorpholinesPhosphatidylinositol 3-KinasesPhosphodiesterase InhibitorsRNA, MessengerWortmannin

Identifiers

PMID17300515
PMCPMC3124632
OpenAlexW2154807783

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.