Evidence map›Paper›PMID 17299050›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2007

Resistance of human T cell leukemia virus type 1 to APOBEC3G restriction is mediated by elements in nucleocapsid.

David Derse, Shawn A Hill, Gerald Princler, Patricia Lloyd, Gisela Heidecker

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 91 papers.

0numbers the graph read from it
0cells of the map it votes in
91citing papers in PubMed
5.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

91 citing papers in PubMed, 125 citations in OpenAlex.

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  7. Vulnerability to APOBEC3G linked to the pathogenicity of deltaretroviruses.Proceedings of the National Academy of Sciences of the United States of America · 2024
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31 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

David DerseHIV Drug Resistance Program, National Cancer Institute, Frederick, MD 21702-1201, USA. derse@ncifcrf.gov
Shawn A Hill
Gerald Princler
Patricia Lloyd
Gisela Heidecker
National Cancer Institute · USHarvard University · US

Funding

Retrovirus Gene Regulation: HTLV-1 Transmission of RepliZ01BC010003 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI DERSE, DAVID · 1996 to 2008
$2.3M
Molecular Mechanisms of HTLV-1 Infection and ReplicationZIABC010003 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI DERSE, DAVID · 2009 to 2009
$1.2M
6 · The paper itself

Abstract

Human T cell leukemia virus type 1 (HTLV-1) has evolved a remarkable strategy to thwart the antiviral effects of the cellular cytidine deaminase APOBEC3G (hA3G). HTLV-1 infects T lymphocytes in vivo, where, like HIV-1, it is likely to encounter hA3G. HIV-1 counteracts the innate antiviral activity of hA3G by producing an accessory protein, Vif, which hastens the degradation of hA3G. In contrast, HTLV-1 does not encode a Vif homologue; instead, HTLV-1 has evolved a cis-acting mechanism to prevent hA3G restriction. We demonstrate here that a peptide motif in the C terminus of the HTLV-1 nucleocapsid (NC) domain inhibits hA3G packaging into nascent virions. Mutation of amino acids within this region resulted in increased levels of hA3G incorporation into virions and increased susceptibility to hA3G restriction. Elements within the C-terminal extension of the NC domain are highly conserved among the primate T cell leukemia viruses, but this extension is absent in all other retroviral NC proteins.

Indexed as

Amino Acid MotifsAmino Acid SequenceAPOBEC-3G DeaminaseConserved SequenceCytidine DeaminaseGene Products, gagGene Products, vifHeLa CellsHIV-1HumansHuman T-lymphotropic virus 1Molecular Sequence DataMutant ProteinsNucleocapsidNucleoside DeaminasesPeptidesAPOBEC-3G DeaminaseAPOBEC3G protein, humanCytidine DeaminaseGene Products, gagGene Products, vifMutant ProteinsNucleoside DeaminasesPeptidesRepressor Proteinsvif Gene Products, Human Immunodeficiency Virus

Identifiers

PMID17299050
PMCPMC1815281
OpenAlexW2133301780

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.