Evidence map›Paper›PMID 1729697›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America1992

Complete sequence of a cDNA clone specifying sandbar shark immunoglobulin light chain: gene organization and implications for the evolution of light chains.

V S Hohman, S F Schluter, J J Marchalonis

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 1992. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 63 citations in OpenAlex.

  1. The immunoglobulins of cartilaginous fishes.Developmental and comparative immunology · 2021
    Review
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  10. Genomic clone for sandbar shark lambda light chain: generation of diversity in the absence of gene rearrangement.Proceedings of the National Academy of Sciences of the United States of America · 1993
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

V S HohmanDepartment of Microbiology and Immunology, University of Arizona, College of Medicine, Tucson 85724.
S F Schluter
J J Marchalonis
University of Arizona · US

Funding

IMMUNE-LIKE PROTEINS OF INVERTEBRATESR01GM042437 · NIGMS · UNIVERSITY OF ARIZONA · PI MARCHALONIS, JOHN J. · 1989 to 1993
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NIGMS NIH HHS GM42437
6 · The paper itself

Abstract

A full-length cDNA clone specifying sandbar shark (Carcharhinus plumbeus) immunoglobulin light chain has been isolated and sequenced. By alignment with human lambda chains, the leader, framework, complementarity-determining, joining, and constant regions are clearly identified in the shark light chain. Approximately 40-50% identity is shared between the human and shark sequences in the variable and constant regions. We have performed sequence comparisons of the individual segments and constructed phylogenetic trees for the variable region. These studies identify the shark protein as a lambda chain. In addition, the sandbar shark light chain is only distantly related to that of horned shark (Heterodontus francisci) [Shamblott, M. J. & Litman, G. W. (1989) Proc. Natl. Acad. Sci. USA 86, 4684-4688], demonstrating that the long evolutionary time of divergence among shark species has led to the generation of substantial differences in sequence. The positions of the variable, joining, and constant gene segments in 14 genomic clones have been mapped. The segments are linked in individual clusters (variable, joining, constant) occupying 3-7 kilobases. Cluster arrangement can be grouped into two patterns based upon spacing between the genes in the individual clones. This arrangement is fundamentally different from that observed in higher vertebrates.

Indexed as

Genes, ImmunoglobulinAmino Acid SequenceAnimalsBase SequenceCloning, MolecularDNAImmunoglobulin Light ChainsMolecular Sequence DataPhylogenyRestriction MappingSequence AlignmentSharksDNAImmunoglobulin Light Chains

Identifiers

PMID1729697
PMCPMC48219
OpenAlexW2066197804

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.