Evidence map›Paper›PMID 17296939›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2007

The catalytic subunit of DNA-protein kinase (DNA-PKcs) is not required for Ig class-switch recombination.

Kerstin Kiefer, Jennifer Oshinsky, Jiyoon Kim, Pamela B Nakajima, Gayle C Bosma, Melvin J Bosma

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 31 citations in OpenAlex.

  1. Review
  2. Review
  3. Kinase-dependent structural role of DNA-PKcs during immunoglobulin class switch recombination.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Non-homologous end joining in class switch recombination: the beginning of the end.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2009
    Review
  9. Article
  10. Article
  11. Fixing DNA breaks during class switch recombination.The Journal of experimental medicine · 2008
    Review
  12. Review
  13. Review
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Kerstin KieferInstitute for Cancer Research, Fox Chase Cancer Center, 333 Cottman Avenue, Philadelphia, PA 19111, USA.
Jennifer Oshinsky
Jiyoon Kim
Pamela B Nakajima
Gayle C Bosma
Melvin J Bosma
Fox Chase Cancer Center · USThomas Jefferson University · US

Funding

WORD PROCESSING CENTER--COREP30CA006927 · NCI · RESEARCH INST OF FOX CHASE CAN CTR · PI Margaret von Mehren · 1985 to 2026
$138.8M
SEVERE COMBINED IMMUNODEFICIENCYR01CA004946 · NCI · INSTITUTE FOR CANCER RESEARCH · PI BOSMA, MELVIN J · 1985 to 2005
$2.8M
NCI NIH HHS CA 06927NCI NIH HHS CA 94946NCI NIH HHS P30 CA006927NCI NIH HHS R01 CA004946
6 · The paper itself

Abstract

The joining of DNA ends during Ig class-switch recombination (CSR) is thought to involve the same nonhomologous end-joining pathway as used in V(D)J recombination. However, we reported earlier that CSR can readily occur in Ig transgenic SCID mice lacking DNA-dependent protein kinase (DNA-PK) activity, a critical enzymatic activity for V(D)J recombination. We were thus led to question whether the catalytic subunit of DNA-PK (DNA-PKcs) is essential for CSR. To address this issue, we asked whether class switching to different Ig isotypes could occur in a line of Ig transgenic mice lacking detectable DNA-PKcs protein. The answer was affirmative. We conclude that joining of DNA ends during CSR does not require DNA-PKcs and can occur by an alternative repair pathway to that used for V(D)J recombination.

Indexed as

Catalytic DomainRecombination, GeneticAdoptive TransferAnimalsB-LymphocytesBone Marrow CellsBreedingCell CountDNA-Activated Protein KinaseDNA-Binding ProteinsFlow CytometryGenotypeImmunoglobulin Class SwitchingImmunoglobulinsMiceMice, SCIDDNA-Activated Protein KinaseDNA-Binding ProteinsImmunoglobulinsNuclear ProteinsPrkdc protein, mouse

Identifiers

PMID17296939
PMCPMC1815269
OpenAlexW2003617431

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.