Evidence map›Paper›PMID 17296727›Full record

ArticleMolecular and cellular biology2007

ELA1 and CUL3 are required along with ELC1 for RNA polymerase II polyubiquitylation and degradation in DNA-damaged yeast cells.

Balazs Ribar, Louise Prakash, Satya Prakash

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 79 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Transcriptional Reprogramming ofJournal of fungi (Basel, Switzerland) · 2023
    Article
  6. Structure of the transcribing RNA polymerase II-Elongin complex.Nature structural & molecular biology · 2023
    Article
  7. Article
  8. The Ubiquitin-like Proteins ofBiomolecules · 2023
    Review
  9. The Paf1 complex is required for RNA polymerase II removal in response to DNA damage.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  10. Article
  11. Review
  12. Elongin functions as a loading factor for Mediator at ATF6α-regulated ER stress response genes.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  13. Article
  14. Review
  15. Review
  16. Review
  17. Cuminal InhibitsMicroorganisms · 2020
    Article
  18. Article
  19. Review
  20. Substrate selection by the proteasome through initiation regions.Protein science : a publication of the Protein Society · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Balazs RibarUniversity of Texas Medical Branch at Galveston, 301 University Blvd., Galveston, TX 77555-1061, USA.
Louise Prakash
Satya Prakash
The University of Texas Medical Branch at Galveston · US

Funding

Repair of UV irradiated DNA: excision genes of yeastR37CA041261 · NCI · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI PRAKASH, SATYA · 2002 to 2011
$3.8M
Transcription-coupled DNA repair in yeastR01CA035035 · NCI · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI PRAKASH, SATYA · 1985 to 2008
$1.7M
EXCISION REPAIR OF UV IRRADIATED DNA IN YEASTR37CA035035 · NCI · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI PRAKASH, SATYA · 1993 to 2001
$682k
REPAIR OF UV IRRADIATED DNA: EXCISION GENES OF YEASTR01CA041261 · NCI · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI PRAKASH, SATYA · 1986 to 2000
$352k
NCI NIH HHS CA35035NCI NIH HHS CA41261NCI NIH HHS R01 CA035035NCI NIH HHS R01 CA041261NCI NIH HHS R37 CA035035NCI NIH HHS R37 CA041261
6 · The paper itself

Abstract

Treatment of yeast and human cells with DNA-damaging agents elicits lysine 48-linked polyubiquitylation of Rpb1, the largest subunit of RNA polymerase II (Pol II), which targets Pol II for proteasomal degradation. However, the ubiquitin ligase (E3) responsible for Pol II polyubiquitylation has not been identified in humans or the yeast Saccharomyces cerevisiae. Here we show that elongin A (Ela1) and cullin 3 (Cul3) are required for Pol II polyubiquitylation and degradation in yeast cells, and on the basis of these and other observations, we propose that an E3 comprised of elongin C (Elc1), Ela1, Cul3, and the RING finger protein Roc1 (Rbx1) mediates this process in yeast cells. This study provides, in addition to the identification of the E3 required for Pol II polyubiquitylation and degradation in yeast cells, the first evidence for a specific function in yeast for a member of the elongin C/BC-box protein/cullin family of ligases. Also, these observations raise the distinct possibility that the elongin C-containing ubiquitin ligase, the von Hippel-Lindau tumor suppressor complex, promotes Pol II polyubiquitylation and degradation in human cells.

Indexed as

DNA Damage4-Nitroquinoline-1-oxideCullin ProteinsElonginMutationPolyubiquitinProtein Processing, Post-TranslationalQuinolonesRNA Polymerase IISaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsTranscription FactorsUltraviolet Rays4-Nitroquinoline-1-oxide4-nitroquinolone-1-oxideCUL3 protein, S cerevisiaeCullin ProteinsELOA protein, humanELOC protein, humanElonginPolyubiquitinQuinolonesRNA Polymerase IIRPB1 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsTranscription Factors

Identifiers

PMID17296727
PMCPMC1899920
OpenAlexW2116317104

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.