Evidence map›Paper›PMID 1729611›Full record

ArticleMolecular and cellular biology1992

PU.1 recruits a second nuclear factor to a site important for immunoglobulin kappa 3' enhancer activity.

J M Pongubala, S Nagulapalli, M J Klemsz, S R McKercher, R A Maki, M L Atchison

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 1992. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 128 papers.

0numbers the graph read from it
0cells of the map it votes in
128citing papers in PubMed
7.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

128 citing papers in PubMed, 356 citations in OpenAlex.

  1. Article
  2. The dynamic functions of IRF4 in B cell malignancies.Clinical and experimental medicine · 2023
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  10. Role of IRF4-Mediated Inflammation: Implication in Neurodegenerative Diseases.Neurology & neurotherapy open access journal · 2017
    Article
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  15. Review
  16. Review
  17. Article
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  19. Article
  20. Article

68 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

J M PongubalaDepartment of Animal Biology, University of Pennsylvania School of Veterinary Medicine, Philadelphia 19104-6048.
S Nagulapalli
M J Klemsz
S R McKercher
R A Maki
M L Atchison
University of Pennsylvania · US

Funding

DEVELOPMENTAL CONTROL OF IMMUNOGLOBULIN TRANSCRIPTIONR01GM042415 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI ATCHISON, MICHAEL L. · 1989 to 2005
$1.7M
TRANSCRIPTION FACTOR PU 1R01AI030656 · NIAID · BURNHAM INSTITUTE FOR MEDICAL RESEARCH · PI MAKI, RICHARD A · 1991 to 1998
–
NIAID NIH HHS AI 30656NIGMS NIH HHS GM 42415
6 · The paper itself

Abstract

PU.1 is a B-cell- and macrophage-specific transcription factor. By an electrophoretic mobility shift assay and dimethyl sulfate methylation interference assays, we show that PU.1 binds to DNA sequences within the immunoglobulin kappa 3' enhancer (kappa E3'). Binding of PU.1 to the kappa E3' enhancer assists the binding of a second tissue-restricted factor, NF-EM5, to an adjacent site. Binding of NF-EM5 to kappa E3' DNA sequences requires protein-protein interaction with PU.1 as well as specific protein-DNA interactions. This is the first known instance of PU.1 interacting with another cellular protein. NF-EM5 does not cofractionate with PU.1, suggesting that it is a distinct protein and is not a posttranslational modification of PU.1. UV-crosslinking studies and elution from sodium dodecyl sulfate-polyacrylamide gels indicate that NF-EM5 is a protein of approximately 46 kDa. Site-directed mutagenesis studies of the PU.1- and EM5-binding sites indicate that these sites play important roles in kappa E3' enhancer activity. By using a series of PU.1 deletion constructs, we have identified a region in PU.1 that is necessary for interaction with NF-EM5. This segment encompasses a 43-amino-acid region with PEST sequence homology, i.e., one that is rich in proline (P), glutamic acid (E), serine (S), and threonine (T).

Indexed as

Enhancer Elements, GeneticBase SequenceBinding SitesCell LineDNADNA-Binding ProteinsElectrophoresis, Polyacrylamide GelImmunoglobulin kappa-ChainsMolecular Sequence DataMutagenesis, Site-DirectedNuclear ProteinsOrgan SpecificityRetroviridae Proteins, OncogenicTranscription FactorsDNADNA-Binding ProteinsImmunoglobulin kappa-ChainsNuclear ProteinsRetroviridae Proteins, OncogenicTranscription Factorsv-Spi-1 protein, Friend spleen focus-forming virus

Identifiers

PMID1729611
PMCPMC364131
OpenAlexW1909754239

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.