Evidence map›Paper›PMID 1729601›Full record

ArticleMolecular and cellular biology1992

Selective activation of a discrete family of endogenous proviral elements in normal BALB/c lymphocytes.

J A Mietz, J W Fewell, E L Kuff

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 1992. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
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  3. Review
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  9. Article
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  11. Review
  12. Co-amplification to tail-to-tail copies of MuRVY and IAPE retroviral genomes on the Mus musculus Y chromosome.Mammalian genome : official journal of the International Mammalian Genome Society · 1996
    Article
  13. Mapping of mouse intracisternal A-particle proviral markers in an interspecific backcross.Mammalian genome : official journal of the International Mammalian Genome Society · 1994
    Article
  14. Article
  15. Genomic mapping of intracisternal A-particle proviral elements.Mammalian genome : official journal of the International Mammalian Genome Society · 1993
    Article
  16. Intracisternal A-particle-specific oligonucleotides provide multilocus probes for genetic linkage studies in the mouse.Mammalian genome : official journal of the International Mammalian Genome Society · 1992
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

J A MietzLaboratory of Biochemistry, National Cancer Institute, Bethesda, Maryland 20892.
J W Fewell
E L Kuff

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Intracisternal A-particle (IAP) proviral elements are abundant and widely dispersed in the mouse genome. IAP-related transcripts have been detected in normal mouse tissues where expression is under genetic control. In this study, we sought to determine whether IAP expression in BALB/c thymus and lipopolysaccharide-stimulated B cells was due to selective or indiscriminate activation of IAP elements. cDNA libraries were prepared from each source. A total of 86 IAP cDNA clones were isolated from both libraries, and 37 of these were sequenced over a common 0.7- to 1.0-kb region of the IAP genome that included the 3' long terminal repeat (LTR). Three highly related families of elements were found to be expressed in the two cell types examined. All of the related elements had a distinctive U3 regulatory region. Thirteen individual IAP proviral elements were distinguished on the basis of sequence differences within the R region of the LTR. Hybridization of genomic DNA with element-specific oligonucleotide probes confirmed the presence of a restricted number of proviral copies in the lymphocyte-specific family of elements. Most of these copies were found to be methylated in the lymphocyte DNA, but at least seven were hypomethylated in their 5' LTRs. This study shows that activation of IAP elements in normal normal mouse lymphocytes is highly selective. Activation is probably a function of both sequence specificity and methylation status of the proviral LTR.

Indexed as

Virus ActivationAnimalsBase SequenceB-LymphocytesCell LineCloning, MolecularDNAElectrophoresis, Gel, Two-DimensionalGene Expression Regulation, ViralGenes, Intracisternal A-ParticleLymphocytesMiceMice, Inbred BALB CMolecular Sequence DataProvirusesRepetitive Sequences, Nucleic AcidDNA

Identifiers

PMID1729601
PMCPMC364086
OpenAlexW2253395983

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.