Evidence map›Paper›PMID 17294240›Full record

ArticlePlanta2007

Expression and localization of AtAGP18, a lysine-rich arabinogalactan-protein in Arabidopsis.

Jie Yang, Allan M Showalter

Abstract read
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In one paragraph

Article in Planta, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 42 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. Review
  7. Article
  8. Glycosylphosphatidylinositol-Anchored Proteins inFrontiers in plant science · 2019
    Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Jie YangDepartment of Environmental and Plant Biology, Ohio University, 504 Porter Hall, Athens, OH 45701-2979, USA.
Allan M Showalter
Ohio University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Arabinogalactan-proteins (AGPs) are present on the surface of all plant cells. AtAGP17, 18 and 19 comprise the lysine-rich AGP subfamily in Arabidopsis and consist of an N-terminal signal peptide, a classical AGP domain interrupted by a small Lys-rich region and a C-terminal glycosylphosphatidylinositol (GPI) anchor addition sequence. Organ- and tissue-specific expression patterns and subcellular localization of AtAGP18 were studied and compared to other Lys-rich AGPs. AtAGP18 was highly expressed in roots, flowers and stems and weakly expressed in seedlings and rosettes. High AtAGP18 promoter activity was closely associated with vascular tissues and high in young organs as well as styles. Microarray and massively parallel signature sequencing (MPSS) data were also examined and showed largely consistent transcription profiles of AtAGP18. On the protein level, AtAGP18 was most abundant in roots and flowers, moderate in stems, seedlings and siliques and low in rosette leaves. Furthermore, AtAGP18 was localized to the plasma membrane and to Hechtian strands, following plasmolysis of tobacco cultured cells expressing a green fluorescence protein (GFP)-AtAGP18 fusion protein. Localization of AtAGP18 on the plasma membrane was further confirmed by biochemical two-phase fractionation and Western blotting. These expression and localization data further our understanding of AtAGP18 and provide a molecular basis to approach and decipher its function.

Indexed as

Amino Acid SequenceArabidopsisArabidopsis ProteinsBlotting, NorthernFlowersGene Expression Regulation, PlantLysineMolecular Sequence DataMucoproteinsOligonucleotide Array Sequence AnalysisPhylogenyPlant LeavesPlant ProteinsPlant RootsPromoter Regions, GeneticSequence AlignmentArabidopsis Proteinsarabinogalactan proteinsLysineMucoproteinsPlant Proteins

Identifiers

PMID17294240
OpenAlexW2144557674

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.