ArticlePlant cell reports2007
Microarray analysis of apple gene expression engaged in early fruit development.
Article in Plant cell reports, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.
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Who cites it
30 citing papers in PubMed.
- Molecular regulation of apple and grape ripening: exploring common and distinct transcriptional aspects of representative climacteric and non-climacteric fruits.Journal of experimental botany · 2023Review
- Somatic Mutations in Fruit Trees: Causes, Detection Methods, and Molecular Mechanisms.Plants (Basel, Switzerland) · 2023Review
- Article
- Drought Stress Mitigating Morphological, Physiological, Biochemical, and Molecular Responses of Guava (Frontiers in plant science · 2022Article
- Genome wide analysis of kinesin gene family in Citrullus lanatus reveals an essential role in early fruit development.BMC plant biology · 2021Article
- Comparative Study of Volatile Compounds and Expression of Related Genes in Fruit from Two Apple Cultivars during Different Developmental Stages.Molecules (Basel, Switzerland) · 2021Article
- Global Identification, Classification, and Expression Analysis of MAPKKK genes: Functional Characterization of MdRaf5 Reveals Evolution and Drought-Responsive Profile in Apple.Scientific reports · 2017Article
- Transcriptome Analysis of Calcium- and Hormone-Related Gene Expressions during Different Stages of Peanut Pod Development.Frontiers in plant science · 2017Article
- A Transcriptome Approach Toward Understanding Fruit Softening in Persimmon.Frontiers in plant science · 2017Article
- Cell wall dynamics during apple development and storage involves hemicellulose modifications and related expressed genes.BMC plant biology · 2016Article
- Suppression Subtractive Hybridization Versus Next-Generation Sequencing in Plant Genetic Engineering: Challenges and Perspectives.Molecular biotechnology · 2015Review
- Multiscale investigation of mealiness in apple: an atypical role for a pectin methylesterase during fruit maturation.BMC plant biology · 2014Article
- Expression Comparison of Oil Biosynthesis Genes in Oil Palm Mesocarp Tissue Using Custom Array.Microarrays (Basel, Switzerland) · 2014Article
- Microarray analysis of differentially expressed genes engaged in fruit development between table and wine grape.Molecular biology reports · 2014Article
- Comparative transcriptome analysis of aerial and subterranean pods development provides insights into seed abortion in peanut.Plant molecular biology · 2014Article
- Genomics and bioinformatics resources for translational science in Rosaceae.Plant biotechnology reports · 2014Review
- Callose and cellulose synthase gene expression analysis from the tight cluster to the full bloom stage and during early fruit development in Malus × domestica.Journal of plant research · 2014Article
- Dynamic changes in proteins during apple (Malus x domestica) fruit ripening and storage.Horticulture research · 2014Article
- Transcriptome analyses of early cucumber fruit growth identifies distinct gene modules associated with phases of development.BMC genomics · 2012Article
- Article
Corrections and comments
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Authors and funding
9 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
To evaluate gene expressions mostly engaged in early development of apple fruit, we performed the identification of transcripts differentially expressed in young fruit by using microarrays spotted with 6,253 cDNAs collected from young and mature apple fruits of the cultivar Fuji (Malus domestica Borkh. cv. Fuji). A total of 3,484 cDNAs out of 6,253 were selected after quality control of microarray spots and analyzed for differential gene expression patterns between young fruit and other tissues (mature fruit, leaf and flower). Among them, 192 cDNAs displayed a signal value higher than twofold in young fruit compared with other tissues. Blast analysis of the 192 cDNA clones identified 88 non-redundant groups encoding proteins with known function and 50 non-redundant groups with unknown function. The putative protein products were classified into the following categories: photosynthesis (16.7%), protein synthesis (12.3%), cell proliferation and differentiation (10.9%), cell enlargement (5.8%), metabolism (8.0%), stress response (7.2%), others (2.9%), and unknown functions (32.2%). Furthermore, confirming the microarray data by reverse transcription-polymerase chain reaction revealed that the wide range of transcripts differentially expressed in young fruit was expressed in other organs but not in the mature fruit. The data presented suggested that apple fruit development depends on the tight regulation of the expression of a number of genes, which are also expressed in other organs.
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