Evidence map›Paper›PMID 17292925›Full record

ReviewMutation research2007

Hypoxia-induced and stress-specific changes in chromatin structure and function.

Amber Buescher Johnson, Michelle Craig Barton

Abstract readReview
In one paragraph

Review in Mutation research, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
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  8. Article
  9. Article
  10. Review
  11. Review
  12. A Spontaneous Nonhuman Primate Model of Myopic Foveoschisis.Investigative ophthalmology & visual science · 2023
    Article
  13. A pleiotropic hypoxia-sensitiveScience advances · 2022
    Article
  14. Review
  15. Review
  16. Review
  17. Review
  18. Review
  19. Proteome Stability as a Key Factor of Genome Integrity.International journal of molecular sciences · 2017
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Amber Buescher JohnsonDepartment of Biochemistry and Molecular Biology, Program in Genes and Development, Graduate School of Biomedical Sciences, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
Michelle Craig Barton

Funding

TRAINING PROGRAM IN MOLECULAR GENETICS OF CANCERT32CA009299 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI LOZANO, GUILLERMINA · 1985 to 2014
$4.7M
In Vitro Reconstitution of Alpha Fetroprotein RegulationR01GM053683 · NIGMS · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI BARTON, MICHELLE ANN · 1997 to 2007
$1.6M
RECONSTITUTION OF GENE REGULATION IN LIVER REGENERATIONR01GM060213 · NIGMS · UNIVERSITY OF TEXAS MD ANDERSON CAN CTR · PI BARTON, MICHELLE ANN · 2000 to 2003
$1.0M
NCI NIH HHS T32 CA009299NIGMS NIH HHS GM053686NIGMS NIH HHS R01 GM053683NIGMS NIH HHS R01 GM060213
6 · The paper itself

Abstract

Cellular adaptation to stress relies on specific, regulated responses to evoke changes in gene expression. Stresses such as hypoxia, heat shock, oxidative stress and DNA-damage activate signaling cascades that ultimately lead to either induction or repression of stress-responsive genes. In this review, we concentrate on the mechanisms by which stress-induced signaling promotes alterations in chromatin structure, whether the read-out is activation or repression of transcription. Specific alterations in chromatin are highly regulated and dictated by the type of imposed stress. Our primary focus is on the types of chromatin alterations that occur under hypoxic conditions, which exist within a majority of tumors, and to compare these to changes in chromatin structure that occur in response to a wide variety of cellular stresses.

Indexed as

Chromatin Assembly and DisassemblyGene Expression RegulationHypoxiaAnimalsChromatinDNA DamageHeat-Shock ResponseHistone AcetyltransferasesHistonesHumansOxidative StressPhosphorylationProtein BindingTranscription, GeneticChromatinHistone AcetyltransferasesHistones

Identifiers

PMID17292925
PMCPMC1924842

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.