Evidence map›Paper›PMID 17291071›Full record

ArticleBiomacromolecules2007

Mechanistic differences in DNA nanoparticle formation in the presence of oligolysines and poly-L-lysine.

Irina Nayvelt, Thresia Thomas, T J Thomas

Open access · greenAbstract readComparative Study
In one paragraph

Article in Biomacromolecules, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.4field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 47 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Biodegradable Polymers for Gene Delivery.Molecules (Basel, Switzerland) · 2019
    Review
  6. Article
  7. Article
  8. Article
  9. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Irina NayveltDepartment of Medicine, Robert Wood Johnson Medical School, University of Medicine and Dentistry of New Jersey, New Brunswick, New Jersey 08903, USA.
Thresia Thomas
T J Thomas
Environmental and Occupational Health Sciences Institute · USRutgers, The State University of New Jersey · US

Funding

NOVEL OLIGONUCLEOTIDE DELIVERY VEHICLES FOR GENE THERAPYR01CA080163 · NCI · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI THOMAS, TJ · 1999 to 2009
$2.4M
ROLE OF POLYAMINES IN ESTROGEN FUNCTION IN BREAST CANCERR01CA042439 · NCI · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI THOMAS, TJ · 1990 to 2006
$1.7M
POLYAMINE ANALOGS IN ANTIGENE THERAPY FOR BREAST CANCERR01CA073058 · NCI · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI THOMAS, TJ · 1997 to 2004
$1.3M
ROLE OF POLYAMINES IN ESTROGEN FUNCTION IN BREAST CANCERR23CA042439 · NCI · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI THOMAS, THRESIA · 1986 to 1988
–
NCI NIH HHS CA42439NCI NIH HHS CA73058NCI NIH HHS CA80163NCI NIH HHS CA80163-S1NCI NIH HHS R01 CA042439NCI NIH HHS R01 CA073058NCI NIH HHS R01 CA080163
6 · The paper itself

Abstract

We studied the effectiveness of trilysine (Lys3), tetralysine (Lys4), pentalysine (Lys5), and poly-l-lysine (PLL) (MW 50000) on lambda-DNA nanoparticle formation and characterized the size, shape, and stability of nanoparticles. Light scattering experiments showed EC50 (lysine concentration at 50% DNA compaction) values of approximately 0.0036, 2, and 20 micromol/L, respectively, for PLL, Lys5, and Lys4 at 10 mM [Na+]. Plots of log EC50 versus log [Na+] showed positive slopes of 1.09 and 1.7, respectively, for Lys4 and Lys5 and a negative slope of -0.1 for PLL. Hydrodynamic radii of oligolysine condensed particles increased (48-173 nm) with increasing [Na+], whereas no significant change occurred to nanoparticles formed with PLL. There was an increase in the size of nanoparticles formed with Lys5 at >40 degrees C, whereas no such change occurred with PLL. The DNA melting temperature increased with oligolysine concentration. These results indicate distinct differences in the mechanism(s) by which oligolysines and PLL provoke DNA condensation to nanoparticles.

Indexed as

NanoparticlesDNALysineNucleic Acid DenaturationOligopeptidesParticle SizePolylysineTemperatureDNALysineOligopeptidesPolylysine

Identifiers

PMID17291071
PMCPMC2548297
OpenAlexW2009843662

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.