Evidence map›Paper›PMID 17290224›Full record

ArticleThe EMBO journal2007

Distinct C/EBPalpha motifs regulate lipogenic and gluconeogenic gene expression in vivo.

Thomas A Pedersen, Oxana Bereshchenko, Susana Garcia-Silva, Olga Ermakova, Elke Kurz, Susanne Mandrup, Bo T Porse, Claus Nerlov

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in The EMBO journal, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 77 citations in OpenAlex.

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  18. Metabolic regulation of hepatic PNPLA3 expression and severity of liver fibrosis in patients with NASH.Liver international : official journal of the International Association for the Study of the Liver · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Thomas A PedersenEMBL Mouse Biology Unit, Monterotondo, Italy.
Oxana Bereshchenko
Susana Garcia-Silva
Olga Ermakova
Elke Kurz
Susanne Mandrup
Bo T Porse
Claus Nerlov
European Molecular Biology Laboratory · ITUniversity of Southern Denmark · DKCopenhagen University Hospital · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The C/EBPalpha transcription factor regulates hepatic nitrogen, glucose, lipid and iron metabolism. However, how it is able to independently control these processes is not known. Here, we use mouse knock-in mutagenesis to identify C/EBPalpha domains that specifically regulate hepatic gluconeogenesis and lipogenesis. In vivo deletion of a proline-histidine rich domain (PHR), dephosphorylated at S193 by insulin signaling, dysregulated genes involved in the generation of acetyl-CoA and NADPH for triglyceride synthesis and led to increased hepatic lipogenesis. These promoters bound SREBP-1 as well as C/EBPalpha, and the PHR was required for C/EBPalpha-SREBP transcriptional synergy. In contrast, the highly conserved C/EBPalpha CR4 domain was found to undergo liver-specific dephosphorylation of residues T222 and T226 upon fasting, and alanine mutation of these residues upregulated the hepatic expression of the gluconeogenic G6Pase and PEPCK mRNAs, but not PGC-1alpha, leading to glucose intolerance. Our results show that pathway-specific metabolic regulation can be achieved through a single transcription factor containing context-sensitive regulatory domains, and indicate C/EBPalpha phosphorylation as a PGC-1alpha-independent mechanism for regulating hepatic gluconeogenesis.

Indexed as

Protein Structure, TertiaryAmino Acid SequenceAnimalsBlotting, WesternCCAAT-Enhancer-Binding Protein-alphaChromatin ImmunoprecipitationDNA PrimersGene Expression RegulationGluconeogenesisHepatocytesLipogenesisMiceMolecular Sequence DataMutagenesisPhosphorylationPolymerase Chain ReactionCCAAT-Enhancer-Binding Protein-alphaDNA PrimersSrebf1 protein, mouseSterol Regulatory Element Binding Protein 1

Identifiers

PMID17290224
PMCPMC1852842
OpenAlexW1972578714

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.