Evidence map›Paper›PMID 17289077›Full record

ArticleJournal of molecular biology2007

Developmental regulators containing the I-mfa domain interact with T cyclins and Tat and modulate transcription.

Qi Wang, Tara M Young, Michael B Mathews, Tsafi Pe'ery

Abstract read
In one paragraph

Article in Journal of molecular biology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 18 citations in OpenAlex.

  1. C166 EVs potentiate miR cardiac reprogramming via miR-148a-3p.Journal of molecular and cellular cardiology · 2024
    Article
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  5. Article
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  8. P-TEFb- the final frontier.Cell division · 2009
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Qi WangUniversity of Medicine and Dentistry of New Jersey, Department of Biochemistry and Molecular Biology, New Jersey Medical School, Newark, NJ 07103-2714, USA.
Tara M Young
Michael B Mathews
Tsafi Pe'ery
Rutgers, The State University of New Jersey · USRutgers New Jersey Medical School

Funding

Functions of Double-stranded RNA Binding ProteinsR01AI034552 · NIAID · UNIV OF MED/DENT OF NJ-NJ MEDICAL SCHOOL · PI MATHEWS, MICHAEL B · 1993 to 2008
$4.4M
Compensating Tat/TAR mutations in drug-resistant HIV-1R21AI060403 · NIAID · UNIV OF MED/DENT OF NJ-NJ MEDICAL SCHOOL · PI PE'ERY, TSAFI · 2004 to 2005
$428k
Regulation of HIV transcription by Tat and P-TEPbR21AI055331 · NIAID · UNIV OF MED/DENT OF NJ-NJ MEDICAL SCHOOL · PI PE'ERY, TSAFI · 2004 to 2004
$389k
NIAID NIH HHS AI060403NIAID NIH HHS AI34552NIAID NIH HHS R01 AI034552NIAID NIH HHS R21 AI055331-01A1NIAID NIH HHS R21 AI060403
6 · The paper itself

Abstract

Positive transcription elongation factor b (P-TEFb) complexes, composed of cyclin-dependent kinase 9 (CDK9) and cyclin T1 or T2, are engaged by many cellular transcription regulators that activate or inhibit transcription from specific promoters. The related I-mfa (inhibitor of MyoD family a) and HIC (human I-mfa-domain-containing) proteins function in myogenic differentiation and embryonic development by participating in the Wnt signaling pathway. We report that I-mfa is a novel regulator of P-TEFb. Both HIC and I-mfa interact through their homologous I-mfa domains with cyclin T1 and T2 at two binding sites. One site is the regulatory histidine-rich domain that interacts with CDK9 substrates including RNA polymerase II. The second site contains a lysine and arginine-rich motif that is highly conserved between the two T cyclins. This site overlaps and includes the previously identified Tat/TAR recognition motif of cyclin T1 required for activation of human immunodeficiency virus type 1 (HIV-1) transcription. HIC and I-mfa can serve as substrates for P-TEFb. Their I-mfa domains also bind the activation domain of HIV-1 Tat and inhibit Tat- and P-TEFb-dependent transcription from the HIV-1 promoter. This transcriptional repression is cell-type specific and can operate via Tat and cyclin T1. Genomic and sequence comparisons indicate that the I-mf and HIC genes, as well as flanking genes, diverged from a duplicated chromosomal region. Our findings link I-mfa and HIC to viral replication, and suggest that P-TEFb is modulated in the Wnt signaling pathway.

Indexed as

Amino Acid SequenceAnimalsBase SequenceBinding SitesCell LineCyclin-Dependent Kinase 9CyclinsCyclin TDNA PrimersEvolution, MolecularGene DuplicationGene Products, tatHeLa CellsHIV-1HumansIn Vitro TechniquesCCNT1 protein, humanCCNT2 protein, humanCDK9 protein, humanCyclin-Dependent Kinase 9CyclinsCyclin TDNA PrimersGene Products, tatMDFIC protein, humanMDFI protein, humanMultiprotein ComplexesMyogenic Regulatory FactorsPositive Transcriptional Elongation Factor Btat Gene Products, Human Immunodeficiency Virus

Identifiers

PMID17289077
PMCPMC1868487
OpenAlexW2076552120

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.