Evidence map›Paper›PMID 17287267›Full record

ArticleJournal of virology2007

Multiple roles of Epstein-Barr virus SM protein in lytic replication.

Zhao Han, Elessa Marendy, Yong-Dong Wang, Jing Yuan, Jeffery T Sample, Sankar Swaminathan

Erratum issuedAbstract read
In one paragraph

Article in Journal of virology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 34 citations in OpenAlex.

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  7. Epstein-Barr virus co-opts TFIIH component XPB to specifically activate essential viral lytic promoters.Proceedings of the National Academy of Sciences of the United States of America · 2020
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  13. Spironolactone blocks Epstein-Barr virus production by inhibiting EBV SM protein function.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
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4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

6 authors at 4 institutions in 1 country.

Zhao HanUniversity of Florida, UF Shands Cancer Center, 1376 Mowry Road, Gainesville, FL 32610-3633, and Department of Biochemistry, St. Jude Children's Research Hospital, Memphis, TN 38105, USA.
Elessa Marendy
Yong-Dong Wang
Jing Yuan
Jeffery T Sample
Sankar Swaminathan
St. Jude Children's Research Hospital · USHarvard University · USUniversity of Florida · USUniversity of Florida Health · US

Funding

Viral Vector Technology (VVTSR)P30CA021765 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI CHARLES ROBERTS · 1985 to 2026
$166.9M
POSTTRANSCRIPTIONAL GENE REGULATION BY EBV SM PROTEINR01CA081133 · NCI · UNIVERSITY OF UTAH · PI SWAMINATHAN, SANKAR · 1999 to 2022
$4.9M
Regulation of Epstein Barr Virus PersistenceR01CA056639 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI SAMPLE, JEFFERY T · 1992 to 2006
$1.6M
Role of Epstein-Barr Virus in Burkitt LymphomaR01CA073544 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI SAMPLE, JEFFERY T · 1996 to 2007
$1.6M
Viral and cellular gene regulation during lytic KSHV replicationR01CA119905 · NCI · UNIVERSITY OF UTAH · PI SWAMINATHAN, SANKAR · 2006 to 2010
$1.1M
NCI NIH HHS CA056639NCI NIH HHS CA073544NCI NIH HHS CA081133NCI NIH HHS CA119905NCI NIH HHS CA21765NCI NIH HHS P30 CA021765NCI NIH HHS R01 CA056639NCI NIH HHS R01 CA073544NCI NIH HHS R01 CA081133NCI NIH HHS R01 CA119905
6 · The paper itself

Abstract

The effect of Epstein-Barr virus (EBV) SM protein on EBV gene expression was examined using a recombinant EBV strain with the SM gene deleted and DNA microarrays representing all known EBV coding regions. Induction of lytic EBV replication in the absence of SM led to expression of approximately 40% of EBV genes, but a block in expression of over 50% of EBV genes. Contrary to previous findings, several early genes were SM dependent, and lytic EBV DNA replication did not occur in the absence of SM. Notably, two genes essential for lytic EBV DNA replication, BSLF1 and BALF5, encoding EBV DNA primase and polymerase, respectively, were SM dependent. Lytic DNA replication was partially rescued by ectopic expression of EBV primase and polymerase, but virion production was not. Rescue of DNA replication only enhanced expression of a subset of late genes, consistent with a direct requirement for SM for late gene expression in addition to its contribution to DNA replication. Therefore, while SM is essential for most late gene expression, the proximate block to virion production by the EBV SM deletion strain is an inability to replicate linear DNA. The block to DNA replication combined with the direct effect of SM on late gene expression leads to a global deficiency of late gene expression. SM also inhibited BHRF1 expression during productive replication in comparison to that of cells induced into lytic replication in the absence of SM. Thus, SM plays a role in multiple steps of lytic cycle EBV gene expression and that it is transcript-specific in both activation and repression functions.

Indexed as

Gene Expression Regulation, ViralVirus ReplicationDNA-Binding ProteinsDNA-Directed DNA PolymeraseDNA PrimaseDNA ReplicationDNA, ViralGene DeletionGene Expression ProfilingHerpesvirus 4, HumanImmediate-Early ProteinsMicroscopy, FluorescenceOligonucleotide Array Sequence AnalysisRoleTrans-ActivatorsViral ProteinsBALF5 protein, Epstein-barr virusBHRF1 protein, Human herpesvirus 4BRLF1 protein, Human herpesvirus 4DNA-Binding ProteinsDNA-Directed DNA PolymeraseDNA PrimaseDNA, ViralImmediate-Early ProteinsTrans-ActivatorsViral Proteins

Identifiers

PMID17287267
PMCPMC1866120
OpenAlexW2138560608

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.