Evidence map›Paper›PMID 17277370›Full record

ArticleGenetics2007

A balance between two nuclear localization sequences and a nuclear export sequence governs extradenticle subcellular localization.

Katherine E Stevens, Richard S Mann

Abstract read
In one paragraph

Article in Genetics, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Amino acid homorepeats in proteins.Nature reviews. Chemistry · 2020
    Review
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Biochemistry of the tale transcription factors PREP, MEIS, and PBX in vertebrates.Developmental dynamics : an official publication of the American Association of Anatomists · 2014
    Review
  16. Article
  17. Article
  18. A glimpse into dorso-ventral patterning of the Drosophila eye.Developmental dynamics : an official publication of the American Association of Anatomists · 2012
    Review
  19. Variable motif utilization in homeotic selector (Hox)-cofactor complex formation controls specificity.Proceedings of the National Academy of Sciences of the United States of America · 2011
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Katherine E StevensDepartment of Genetics and Development, Columbia University, New York, New York 10032, USA.
Richard S Mann

Funding

Proximo-distal Patterning inthe Drosophila appendegesR01GM058575 · NIGMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI MANN, RICHARD S · 1999 to 2016
$5.7M
NIGMS NIH HHS R01 GM058575
6 · The paper itself

Abstract

During animal development, transcription factor activities are modulated by several means, including subcellular localization. The Hox cofactor Extradenticle (Exd) has a dynamic subcellular localization, such that Exd is cytoplasmic by default, but is nuclear when complexed with another homeodomain protein, Homothorax (Hth). These observations raise the question of whether dimerization with Hth simply induces Exd's nuclear localization or, alternatively, if Hth is also necessary for Exd activity. To address this question, we analyzed the nuclear transport signals in Exd, including a divergent nuclear export signal (NES) and two nuclear localization signals (NLSs). We show that, although these signals are weak compared to canonical signals, they balance each other in Exd. We also provide evidence that Exd contains an NLS mask that contributes to its cytoplasmic localization. With these signals characterized, we generated forms of Exd that are nuclear localized in the absence of Hth. Surprisingly, although these Exd forms are functional, they do not phenocopy Hth overexpression. These findings suggest that Hth is required for Exd activity, not simply for inducing its nuclear localization.

Indexed as

Active Transport, Cell NucleusAmino Acid SequenceAnimalsAnimals, Genetically ModifiedDrosophila melanogasterDrosophila ProteinsGene Expression Regulation, DevelopmentalHomeodomain ProteinsModels, BiologicalMolecular Sequence DataNuclear Export SignalsNuclear Localization SignalsProtein Structure, TertiarySubcellular FractionsTranscription FactorsTranscription, GeneticDrosophila Proteinsexd protein, DrosophilaHomeodomain Proteinshth protein, DrosophilaNuclear Export SignalsNuclear Localization SignalsTranscription Factors

Identifiers

PMID17277370
PMCPMC1855138

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.