Evidence map›Paper›PMID 17277051›Full record

ArticleJournal of bacteriology2007

sigmaB regulates IS256-mediated Staphylococcus aureus biofilm phenotypic variation.

Jaione Valle, Marta Vergara-Irigaray, Nekane Merino, José R Penadés, Iñigo Lasa

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 71 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Regulation of σMicroorganisms · 2023
    Article
  6. Article
  7. Prevalence of the SigB-Deficient Phenotype among ClinicalAntibiotics (Basel, Switzerland) · 2023
    Article
  8. Article
  9. Medicina (Kaunas, Lithuania) · 2022
    Article
  10. Article
  11. Review
  12. Review
  13. Article
  14. Article
  15. σJournal of bacteriology · 2019
    Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Influence of ISAntimicrobial agents and chemotherapy · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Jaione ValleInstituto de Agrobiotecnología, Universidad Pública de Navarra, Pamplona-31006, Spain.
Marta Vergara-Irigaray
Nekane Merino
José R Penadés
Iñigo Lasa
Agrobiotechnology Institute · ESUniversidad Publica de Navarra · ESInstituto Valenciano de Investigaciones Agrarias · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Biofilm formation in Staphylococcus aureus is subject to phase variation, and biofilm-negative derivatives emerge sporadically from a biofilm-positive bacterial population. To date, the only known mechanism for generating biofilm phenotypic variation in staphylococci is the reversible insertion/excision of IS256 in biofilm-essential genes. In this study, we present evidence suggesting that the absence of the sigma(B) transcription factor dramatically increases the rate of switching to the biofilm-negative phenotype in the clinical isolate S. aureus 15981, under both steady-state and flow conditions. The phenotypic switching correlates with a dramatic increase in the number of IS256 copies in the chromosomes of biofilm-negative variants, as well as with an augmented IS256 insertion frequency into the icaC and the sarA genes. IS256-mediated biofilm switching is reversible, and biofilm-positive variants could emerge from biofilm-negative sigma(B) mutants. Analysis of the chromosomal insertion frequency using a recombinant IS256 element tagged with an erythromycin marker showed an almost three-times-higher transposition frequency in a Deltasigma(B) strain. However, regulation of IS256 activity by sigma(B) appears to be indirect, since transposase transcription is not affected in the absence of sigma(B) and IS256 activity is inhibited to wild-type levels in a Deltasigma(B) strain under NaCl stress. Overall, our results identify a new role for sigma(B) as a negative regulator of insertion sequence transposition and support the idea that deregulation of IS256 activity abrogates biofilm formation capacity in S. aureus.

Indexed as

Genetic VariationBacterial ProteinsBase SequenceBiofilmsDNA Transposable ElementsMolecular Sequence DataMutationPhenotypePolymerase Chain ReactionSigma FactorStaphylococcus aureusBacterial ProteinsDNA Transposable ElementsSigma Factor

Identifiers

PMID17277051
PMCPMC1855799
OpenAlexW2171688147

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.