Evidence map›Paper›PMID 17275217›Full record

ArticleGene2007

Bacteriophage-based vectors for site-specific insertion of DNA in the chromosome of Corynebacteria.

Mark Oram, Joelle E Woolston, Andrew D Jacobson, Randall K Holmes, Diana M Oram

Open access · greenAbstract read
In one paragraph

Article in Gene, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 34 citations in OpenAlex.

  1. The mycomembrane proteins PorH and ProtX are inserted at polar growth zones and linked to the cell wall.Proceedings of the National Academy of Sciences of the United States of America · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Mark OramDepartment of Biomedical Sciences, University of Maryland Baltimore, Baltimore, MD 21201, USA.
Joelle E Woolston
Andrew D Jacobson
Randall K Holmes
Diana M Oram
University of Maryland, Baltimore · USUniversity of Colorado Denver · US

Funding

Control of Bacterial Toxins by Viruses and PlasmidsR37AI014107 · NIAID · UNIVERSITY OF COLORADO DENVER · PI HOLMES, RANDALL K · 2005 to 2014
$5.0M
CONTROL OF BACTERIAL TOXINS BY VIRUSES AND PLASMIDSR01AI014107 · NIAID · U.S. UNIFORMED SERVICES UNIV OF HLTH SCI · PI HOLMES, RANDALL K · 1989 to 2004
$1.9M
Control of oxidative stress defenses in C. diphtheriaeK22AI060882 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI ORAM, DIANA M · 2006 to 2007
$270k
NIAID NIH HHS K22 AI060882NIAID NIH HHS K22 AI60882-01NIAID NIH HHS R01 AI014107NIAID NIH HHS R01 AI14107NIAID NIH HHS R37 AI014107
6 · The paper itself

Abstract

In Corynebacterium diphtheriae, diphtheria toxin is encoded by the tox gene of some temperate corynephages such as beta. beta-like corynephages are capable of inserting into the C. diphtheriae chromosome at two specific sites, attB1 and attB2. Transcription of the phage-encoded tox gene, and many chromosomally encoded genes, is regulated by the DtxR protein in response to Fe(2+) levels. Characterizing DtxR-dependent gene regulation is pivotal in understanding diphtheria pathogenesis and mechanisms of iron-dependent gene expression; although this has been hampered by a lack of molecular genetic tools in C. diphtheriae and related Coryneform species. To expand the systems for genetic manipulation of C. diphtheriae, we constructed plasmid vectors capable of integrating into the chromosome. These plasmids contain the beta-encoded attP site and the DIP0182 integrase gene of C. diphtheriae NCTC13129. When these vectors were delivered to the cytoplasm of non-lysogenic C. diphtheriae, they integrated into either the attB1 or attB2 sites with comparable frequency. Lysogens were also transformed with these vectors, by virtue of the second attB site. An integrated vector carrying an intact dtxR gene complemented the mutant phenotypes of a C. diphtheriae DeltadtxR strain. Additionally, strains of beta-susceptible C. ulcerans, and C. glutamicum, a species non-permissive for beta, were each transformed with these vectors. This work significantly extends the tools available for targeted transformation of both pathogenic and non-pathogenic Corynebacterium species.

Indexed as

Virus IntegrationAttachment Sites, MicrobiologicalBacterial ProteinsBacteriophagesBlotting, SouthernChromosomes, BacterialCorynebacteriumCorynebacterium diphtheriaeDNA, BacterialDNA-Binding ProteinsElectroporationEscherichia coliGenetic Complementation TestGenetic VectorsMutagenesis, InsertionalMutationBacterial ProteinsDNA, BacterialDNA-Binding ProteinsDtxR protein, Corynebacterium diphtheriae

Identifiers

PMID17275217
PMCPMC1913493
OpenAlexW2159323108

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.