Evidence map›Paper›PMID 17273560›Full record

ArticleThe Journal of clinical investigation2007

A proximal activator of transcription in epithelial-mesenchymal transition.

Christo D Venkov, Andrew J Link, Jennifer L Jennings, David Plieth, Tsutomu Inoue, Kojiro Nagai, Carol Xu, Yoana N Dimitrova, Frank J Rauscher, Eric G Neilson

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of clinical investigation, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 94 papers.

0numbers the graph read from it
0cells of the map it votes in
94citing papers in PubMed
8.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

94 citing papers in PubMed, 166 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Multifaceted role ofMedComm · 2024
    Review
  5. Review
  6. Review
  7. Article
  8. Article
  9. Review
  10. TRIM28 in cancer and cancer therapy.Frontiers in genetics · 2024
    Review
  11. Lysyl oxidase like-2 in fibrosis and cardiovascular disease.American journal of physiology. Cell physiology · 2023
    Review
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Multifaceted Roles of TRIM Proteins in Colorectal Carcinoma.International journal of molecular sciences · 2020
    Review
  20. Article

34 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Christo D VenkovDepartment of Medicine, Vanderbilt University School of Medicine, D-3100 MCN, Nashville, Tennessee 37232, USA.
Andrew J Link
Jennifer L Jennings
David Plieth
Tsutomu Inoue
Kojiro Nagai
Carol Xu
Yoana N Dimitrova
Frank J Rauscher
Eric G Neilson
Vanderbilt University · USThe Wistar Institute · US

Funding

Tumor Immunology and Microenvironment Research ProgramP30CA068485 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI MATTHEW J TYSKA · 1995 to 2026
$172.8M
TISSUE CoreP50CA098131 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI PARK, BEN HO, PIETENPOL, JENNIFER A · 2003 to 2024
$48.7M
T Lymphocyte based functional genomics of inflammationP01HL068744 · NHLBI · VANDERBILT UNIVERSITY · PI HAWIGER, JACK J · 2002 to 2006
$9.9M
Proteomic Analysis of Eukaryotic Protein SynthesisR01GM064779 · NIGMS · VANDERBILT UNIVERSITY · PI LINK, ANDREW J. · 2002 to 2010
$3.0M
RESPONSE OF RENAL CELLS IN INTERSTITIAL NEPHRITISR01DK046282 · NIDDK · VANDERBILT UNIVERSITY · PI NEILSON, ERIC GRANT · 1993 to 2007
$2.5M
Structural Biology of U-box E3 Ubiquitin LigasesR01GM075156 · NIGMS · VANDERBILT UNIVERSITY · PI CHAZIN, WALTER J. · 2005 to 2013
$2.4M
S100 PROTEINS: STRUCTURAL BASIS OF FUNCTIONAL PROPERTIESR01GM062112 · NIGMS · VANDERBILT UNIVERSITY · PI CHAZIN, WALTER J. · 2000 to 2009
$2.1M
Proteomic Construction of Stress Regulated NetworksR01ES011993 · NIEHS · VANDERBILT UNIVERSITY · PI WEIL, PETER ANTHONY · 2002 to 2005
$2.0M
Gene Entrapment Strategy for Proteomics in MiceR01NS043952 · NINDS · VANDERBILT UNIVERSITY · PI RULEY, HENRY EARL · 2001 to 2003
$1.1M
ZINC FINGERS IN KIDNEY DEVELOPMENTR01DK055926 · NIDDK · VANDERBILT UNIVERSITY · PI NEILSON, ERIC G · 1998 to 1999
–
NCI NIH HHS CA-098131NCI NIH HHS CA-68485NCI NIH HHS P30 CA068485NCI NIH HHS P50 CA098131NHLBI NIH HHS HL-68744NHLBI NIH HHS P01 HL068744NIDDK NIH HHS DK-46282NIDDK NIH HHS DK-55926NIDDK NIH HHS R01 DK046282NIEHS NIH HHS ES-11993NIEHS NIH HHS R01 ES011993NIGMS NIH HHS GM-62112NIGMS NIH HHS GM-64779NIGMS NIH HHS GM-75156NIGMS NIH HHS R01 GM062112NIGMS NIH HHS R01 GM064779NIGMS NIH HHS R01 GM075156NINDS NIH HHS NS-43952NINDS NIH HHS R01 NS043952
6 · The paper itself

Abstract

Epithelial-mesenchymal transition (EMT) is an important mechanism for phenotypic conversion in normal development and disease states such as tissue fibrosis and metastasis. While this conversion of epithelia is under tight transcriptional control, few of the key transcriptional proteins are known. Fibroblasts produced by EMT express a gene encoding fibroblast-specific protein 1 (FSP1), which is regulated by a proximal cis-acting promoter element called fibroblast transcription site-1 (FTS-1). In mass spectrometry, chromatin immunoprecipitation, and siRNA studies, we used FTS-1 as a unique probe for mediators of EMT and identified a complex of 2 proteins, CArG box-binding factor-A (CBF-A) and KRAB-associated protein 1 (KAP-1), that bind this site. Epithelial cells engineered to conditionally express recombinant CBF-A (rCBF-A) activate the transcription of FSP1 and undergo EMT. The FTS-1 response element also exists in the promoters modulating a broader EMT transcriptome, including Twist, and Snail, as well as E-cadherin, beta-catenin, ZO 1, vimentin, alpha1(I) collagen, and alpha-smooth muscle actin, and the induction of rCBF-A appropriately alters their expression as well. We believe formation of the CBF-A/KAP-1/FTS-1 complex is sufficient for the induction of FSP1 and a novel proximal activator of EMT.

Indexed as

Amino Acid SequenceAnimalsBase SequenceCalcium-Binding ProteinsCCAAT-Binding FactorDNA-Binding ProteinsDNA PrimersEpitheliumMaleMesodermMiceMice, Inbred BALB CModels, BiologicalMolecular Sequence DataMultiprotein ComplexesNIH 3T3 CellsCalcium-Binding ProteinsCCAAT-Binding FactorDNA-Binding ProteinsDNA PrimersMultiprotein ComplexesNfyb protein, mouseNuclear ProteinsRepressor ProteinsS100a4 protein, mouseS100 Calcium-Binding Protein A4S100 ProteinsTranscription FactorsTrim28 protein, mouseTripartite Motif-Containing Protein 28

Identifiers

PMID17273560
PMCPMC1783826
OpenAlexW2023600869

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.