Evidence map›Paper›PMID 17268889›Full record

ArticlePlant molecular biology2007

Identification of genes associated with flesh morphogenesis during grapevine fruit development.

Lucie Fernandez, Laurent Torregrosa, Nancy Terrier, Lekha Sreekantan, Jérôme Grimplet, Chris Davies, Mark R Thomas, Charles Romieu, Agnès Ageorges

Abstract read
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In one paragraph

Article in Plant molecular biology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
7.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 97 citations in OpenAlex.

  1. Genome-wide identification and expression analysis of the BURP domain-containing genes inPhysiology and molecular biology of plants : an international journal of functional plant biology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Lucie FernandezUMR BEPC, Campus Agro-M/INRA, 2 place Viala, 34060, Montpellier, Cedex 01, France.
Laurent Torregrosa
Nancy Terrier
Lekha Sreekantan
Jérôme Grimplet
Chris Davies
Mark R Thomas
Charles Romieu
Agnès Ageorges
Sciences pour L’Œnologie · FRCommonwealth Scientific and Industrial Research Organisation · AUInstitut Agro Montpelier · FRPlant Industry · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fruit morphogenesis is a process unique to the angiosperms, and yet little is known about its developmental control. Following fertilization, fruits typically undergo a dramatic enlargement that is accompanied by differentiation of numerous distinct cell types. To identify genes putatively involved in the early development of grapevine fruit, we used the fleshless berry mutant (Vitis vinifera L. cv Ugni Blanc) that has dramatically reduced fruit size due to a lack of pericarp development. Using oligo-specific arrays, 53 and 50 genes were identified as being down- and up-regulated, respectively, in the mutant. In parallel, Suppression Subtractive Hybridization performed between the mutant and the wild type (WT) allowed the identification of new transcripts differentially expressed during the first stages of mutant and WT pericarp development. From this data, the picture emerged that the mutation promotes the expression of several genes related to ripening and/or to stress and impairs the expression of several regulatory genes. Among those, five genes encoding proteins previously reported to be associated with, or involved in, developmental processes in other species (a specific tissue protein 2, ATHB13, a BURP domain protein, PISTILLATA, and YABBY2), were identified and investigated further using real-time PCR and in situ hybridization. Expression in the pericarp was confirmed, specific spatial and/or temporal patterns were detected and differences were observed between the WT and the mutant during fruit development. Expression of these genes appeared to be affected during young fruit development in the mutant, suggesting that they may play a role in grape berry morphogenesis.

Indexed as

Genes, PlantBase SequenceDNA, PlantFlowersFruitGene Expression ProfilingGene Expression Regulation, DevelopmentalGene Expression Regulation, PlantMorphogenesisMutationOligonucleotide Array Sequence AnalysisReverse Transcriptase Polymerase Chain ReactionVitisDNA, Plant

Identifiers

PMID17268889
OpenAlexW1977922673

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.