Evidence map›Paper›PMID 17267446›Full record

ArticleDevelopment (Cambridge, England)2007

Drosophila Varicose, a member of a new subgroup of basolateral MAGUKs, is required for septate junctions and tracheal morphogenesis.

Victoria M Wu, Marcus H Yu, Raehum Paik, Swati Banerjee, Zhiguo Liang, Sarah M Paul, Manzoor A Bhat, Greg J Beitel

Open access · greenAbstract read
In one paragraph

Article in Development (Cambridge, England), 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
55citing papers in PubMed, 1 pooled it
3.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

55 citing papers in PubMed, 1 synthesis or guideline pooled it, 89 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. International journal of molecular sciences · 2021
    Review
  5. Review
  6. Transcriptional Correlates of Chronic Alcohol Neuroadaptation inFrontiers in behavioral neuroscience · 2021
    Article
  7. Review
  8. Article
  9. Neuronal immunoglobulin superfamily cell adhesion molecules in epithelial morphogenesis: insights fromPhilosophical transactions of the Royal Society of London. Series B, Biological sciences · 2020
    Review
  10. Biology open · 2018
    Article
  11. Population Effects of Calcium Phosphate Nanoparticles inACS biomaterials science & engineering · 2017
    Article
  12. Varicose and cheerio collaborate with pebble to mediate semaphorin-1a reverse signaling inProceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Occluding junctions of invertebrate epithelia.Journal of comparative physiology. B, Biochemical, systemic, and environmental physiology · 2016
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Victoria M WuDepartment of Biochemistry, Molecular Biology and Cell Biology, Northwestern University, Evanston, IL 60208, USA.
Marcus H Yu
Raehum Paik
Swati Banerjee
Zhiguo Liang
Sarah M Paul
Manzoor A Bhat
Greg J Beitel
Northwestern University · USUniversity of North Carolina at Chapel Hill · US

Funding

Training Program In Lung SciencesT32HL076139 · NHLBI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI KAREN M RIDGE, Jacob I Sznajder · 2004 to 2026
$9.6M
Molecular Characterization of Axon-Glial InteractionsR01NS050356 · NINDS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI BHAT, MANZOOR A. · 2006 to 2016
$2.9M
Tube-size control by the Na K ATPase &septate junctionsR01GM069540 · NIGMS · NORTHWESTERN UNIVERSITY · PI BEITEL, GREG J · 2004 to 2008
$1.3M
NHLBI NIH HHS 5 T32 HL076139-03NHLBI NIH HHS T32 HL076139NIGMS NIH HHS GM63047NIGMS NIH HHS R01 GM069540NINDS NIH HHS NS50356NINDS NIH HHS R01 NS050356
6 · The paper itself

Abstract

Epithelial tubes are the functional units of many organs, but little is known about how tube sizes are established. Using the Drosophila tracheal system as a model, we previously showed that mutations in varicose (vari) cause tubes to become elongated without increasing cell number. Here we show vari is required for accumulation of the tracheal size-control proteins Vermiform and Serpentine in the tracheal lumen. We also show that vari is an essential septate junction (SJ) gene encoding a membrane associated guanylate kinase (MAGUK). In vivo analyses of domains important for MAGUK scaffolding functions demonstrate that while the Vari HOOK domain is essential, the L27 domain is dispensable. Phylogenetic analyses reveal that Vari helps define a new MAGUK subgroup that includes mammalian PALS2. Importantly, both Vari and PALS2 are basolateral, and the interaction of Vari with the cell-adhesion protein Neurexin IV parallels the interaction of PALS2 and another cell-adhesion protein, Necl-2. Vari therefore bolsters the similarity between Drosophila and vertebrate epithelial basolateral regions, which had previously been limited to the common basolateral localization of Scrib, Dlg and Lgl, proteins required for epithelial polarization at the beginning of embryogenesis. However, by contrast to Scrib, Dlg and Lgl, Vari is not required for cell polarity but rather is part of a cell-adhesion complex. Thus, Vari fundamentally extends the similarity of Drosophila and vertebrate basolateral regions from sharing only polarity complexes to sharing both polarity and cell-adhesion complexes.

Indexed as

AmidohydrolasesAmino Acid SequenceAnimalsCell AdhesionCell Adhesion Molecules, NeuronalCell PolarityDrosophilaDrosophila ProteinsGuanylate CyclaseGuanylate KinasesIntercellular JunctionsMembrane ProteinsMolecular Sequence DataPhylogenyTracheaAmidohydrolasesCell Adhesion Molecules, NeuronalDrosophila ProteinsGuanylate CyclaseGuanylate KinasesMembrane ProteinsNrx protein, Drosophilaserp protein, DrosophilaVari protein, Drosophilaverm protein, Drosophila

Identifiers

PMID17267446
PMCPMC1955473
OpenAlexW2081339142

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.