Evidence map›Paper›PMID 17267413›Full record

ArticleNucleic acids research2007

Design and synthesis of boronic-acid-labeled thymidine triphosphate for incorporation into DNA.

Na Lin, Jun Yan, Zhen Huang, Craig Altier, Minyong Li, Nicolas Carrasco, Mitsu Suyemoto, Lynette Johnston, Siming Wang, Qian Wang and 3 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 65 citations in OpenAlex.

  1. Article
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  16. Review
  17. Review
  18. Functional nucleic acid sensors.Chemical reviews · 2009
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

13 authors at 1 institution in 1 country.

Na LinDepartment of Chemistry and Center for Biotechnology and Drug Design, Campus Box 4098, Georgia State University, Atlanta, GA 30302-4098, USA.
Jun Yan
Zhen Huang
Craig Altier
Minyong Li
Nicolas Carrasco
Mitsu Suyemoto
Lynette Johnston
Siming Wang
Qian Wang
Hao Fang
Julianne Caton-Williams
Binghe Wang
North Carolina State University · US

Funding

FLUORESCENT TAGS TARGETED ON CELL SURFACE CARBOHYDRATESR33CA088343 · NCI · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI WANG, BINGHE · 2002 to 2003
$555k
Bacillus anthracis Detection with RNA MicrochipR21AI058051 · NIAID · GEORGIA STATE UNIVERSITY · PI HUANG, ZHEN · 2005 to 2006
$396k
Fluorescent Aptamers for Glycoprotein DetectionR21CA113917 · NCI · GEORGIA STATE UNIVERSITY · PI WANG, BINGHE · 2005 to 2006
$366k
MRI contrast agents targeting carbohydrate biomarkersR21CA123329 · NCI · GEORGIA STATE UNIVERSITY · PI WANG, BINGHE · 2006 to 2007
$357k
FLUORESCENT TAGS TARGETED ON CELL SURFACE CARBOHYDRATESR21CA088343 · NCI · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI WANG, BINGHE · 2000 to 2001
$288k
NCI NIH HHS CA113917NCI NIH HHS CA123329NCI NIH HHS CA88343NCI NIH HHS N01-CO-27184NCI NIH HHS R21 CA088343NCI NIH HHS R21 CA113917NCI NIH HHS R21 CA123329NCI NIH HHS R33 CA088343NIAID NIH HHS AI058051NIAID NIH HHS R21 AI058051
6 · The paper itself

Abstract

The boronic acid moiety is a versatile functional group useful in carbohydrate recognition, glycoprotein pull-down, inhibition of hydrolytic enzymes and boron neutron capture therapy. The incorporation of the boronic-acid group into DNA could lead to molecules of various biological functions. We have successfully synthesized a boronic acid-labeled thymidine triphosphate (B-TTP) linked through a 14-atom tether and effectively incorporated it into DNA by enzymatic polymerization. The synthesis was achieved using the Huisgen cycloaddition as the key reaction. We have demonstrated that DNA polymerase can effectively recognize the boronic acid-labeled DNA as the template for DNA polymerization, that allows PCR amplification of boronic acid-labeled DNA. DNA polymerase recognitions of the B-TTP as a substrate and the boronic acid-labeled DNA as a template are critical issues for the development of DNA-based lectin mimics via in vitro selection.

Indexed as

Aptamers, NucleotideBoron CompoundsDNADNA-Directed DNA PolymeraseDNA PrimersPolymerase Chain ReactionSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationTemplates, GeneticThymine NucleotidesAptamers, NucleotideBoron CompoundsDNADNA-Directed DNA PolymeraseDNA PrimersThymine Nucleotides

Identifiers

PMID17267413
PMCPMC1851626
OpenAlexW2149433556

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.