Evidence map›Paper›PMID 17264999›Full record

ArticleMicrobial ecology2007

Species-specific bacterial communities in the phycosphere of microalgae?

Melanie Sapp, Anne S Schwaderer, Karen H Wiltshire, Hans-Georg Hoppe, Gunnar Gerdts, Antje Wichels

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Microbial ecology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 80 papers.

0numbers the graph read from it
0cells of the map it votes in
80citing papers in PubMed
6.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

80 citing papers in PubMed, 273 citations in OpenAlex.

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  17. Biotic countermeasures that rescueFrontiers in microbiology · 2023
    Article
  18. Article
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  20. Article

20 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Melanie SappAlfred Wegener Institute Foundation for Polar and Marine Research, Biologische Anstalt Helgoland, Helgoland, Germany. msapp@awi-bremerhaven.de
Anne S Schwaderer
Karen H Wiltshire
Hans-Georg Hoppe
Gunnar Gerdts
Antje Wichels
Alfred-Wegener-Institut Helmholtz-Zentrum für Polar- und Meeresforschung · DEGEOMAR Helmholtz Centre for Ocean Research Kiel · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Specific associations of bacteria with phytoplankton have recently been reported in the literature. In our study, we analyzed bacterial communities of microalgal cultures related to algal growth phases. Seven freshly isolated key diatom and dinoflagellate species from Helgoland Roads, North Sea, were investigated. The community composition of associated bacteria as well as the cell numbers, the photosynthetic efficiency of the algae, and the depletion of inorganic nutrients in the medium were recorded over a period of 8 weeks in batch cultures. Diversity and succession of bacterial communities was analyzed by ribosomal intergenic spacer analysis. Phylogenetic analysis of bacterial populations was performed by denaturing gradient gel electrophoresis of 16S rRNA genes followed by DNA sequence analysis. Members of Alphaproteobacteria and Gammaproteobacteria and the Flavobacteria-Sphingobacteria group within the Bacteroidetes phylum predominated in the cultures. Differences in free-living and attached bacterial populations were observed between the phylogenetic groups. Shifts in the bacterial communities could not be correlated to changes of nutrient levels or algal growth phases. Regarding our results, it should not be generalized that the compositions of the bacterial communities are strictly species specific for microalgae. The importance of factors like the composition of exudates is apparent.

Indexed as

Water MicrobiologyAnimalsBacteroidetesCluster AnalysisDiatomsDinoflagellidaDNA, Ribosomal SpacerNorth SeaPhotosynthesisPhylogenyProteobacteriaSequence Analysis, DNASpecies SpecificityDNA, Ribosomal Spacer

Identifiers

PMID17264999
OpenAlexW1988746971

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.