Evidence map›Paper›PMID 17261608›Full record

ArticleInfection and immunity2007

Comparison of virulence plasmids among Clostridium perfringens type E isolates.

Jihong Li, Kazuaki Miyamoto, Bruce A McClane

Abstract readComparative Study
In one paragraph

Article in Infection and immunity, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed.

  1. The biology and pathogenicity ofMicrobiology and molecular biology reviews : MMBR · 2024
    Review
  2. Identification of a newFrontiers in microbiology · 2024
    Article
  3. Article
  4. Article
  5. Genomic Analysis ofToxins · 2019
    Article
  6. Article
  7. Article
  8. TwoToxins · 2019
    Article
  9. Review
  10. Enterotoxic Clostridia:Microbiology spectrum · 2018
    Article
  11. Review
  12. Review
  13. Review
  14. Article
  15. Clostridium perfringens type A-E toxin plasmids.Research in microbiology · 2015
    Review
  16. Article
  17. Review
  18. Article
  19. Toxin plasmids of Clostridium perfringens.Microbiology and molecular biology reviews : MMBR · 2013
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Jihong LiDepartment of Molecular Genetics and Biochemistry, University of Pittsburgh School of Medicine, Pittsburgh, PA 15261, USA.
Kazuaki Miyamoto
Bruce A McClane

Funding

Clostridium perfringens Type B-D Virulence PlasmidsR01AI056177 · NIAID · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI MC CLANE, BRUCE A, ROOD, JULIAN · 2003 to 2013
$3.8M
Mechanisms of Action of C. Perfringens EnterotoxinR37AI019844 · NIAID · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI MC CLANE, BRUCE A · 2005 to 2014
$3.0M
NIAID NIH HHS R01 AI 056177NIAID NIH HHS R01 AI056177NIAID NIH HHS R37 AI019844NIAID NIH HHS R37 AI 19844
6 · The paper itself

Abstract

Clostridium perfringens type E isolates produce iota-toxin, which is encoded by iap and ibp genes. Using Southern blot analyses, the current study identified iap/ibp plasmids of approximately 97 or approximately 135 kb among eight type E isolates. For most of these isolates, their iap/ibp plasmid also encoded urease and lambda-toxin. However, the beta2-toxin gene, if present, was on a different plasmid from the iap/ibp plasmid. For all isolates, the iap/ibp plasmid carried a tcp locus, strongly suggesting that these plasmids are conjugative. Overlapping PCR analyses demonstrated some similarity between the iap/ibp plasmids and enterotoxin-encoding plasmids of type A isolates. Additional PCR analyses demonstrated that the iap/ibp locus is located near dcm sequences, an apparent plasmid hot spot for toxin gene insertion, and that two IS1151-related sequences are present in the iap/ibp locus. To begin testing whether those IS1151-like sequences can mobilize iap/ibp genes, a PCR assay was performed that amplifies a product only from circular DNA forms that could represent transposition intermediates. This PCR assay detected circular forms containing iap/ibp genes and silent enterotoxin gene sequences, with or without an IS1151-like sequence. Collectively, these results suggest that a mobile genetic element carrying iap/ibp has inserted onto a tcp-carrying enterotoxin plasmid in a type A isolate, creating a progenitor iap/ibp plasmid. That plasmid then spread via conjugation to other isolates, converting them to type E. Further iap/ibp plasmid diversity occurred when either the iap/ibp genes later remobilized and inserted onto other conjugative plasmids or some iap/ibp plasmids acquired additional DNA sequences.

Indexed as

ADP Ribose TransferasesBacterial ProteinsBacterial ToxinsBase SequenceBlotting, SouthernClostridium perfringensConjugation, GeneticDNA, BacterialDNA, CircularDNA Transposable ElementsEnterotoxinsGenes, BacterialMetalloendopeptidasesMolecular Sequence DataPlasmidsPolymerase Chain ReactionADP Ribose TransferasesBacterial ProteinsBacterial Toxinscaseinasecpb2 protein, Clostridium perfringensDNA, BacterialDNA, CircularDNA Transposable Elementsenterotoxin, ClostridiumEnterotoxinsiota toxin, Clostridium perfringensMetalloendopeptidasesUrease

Identifiers

PMID17261608
PMCPMC1865703

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.