Evidence map›Paper›PMID 17259285›Full record

ArticlePlant physiology2007

An Arabidopsis homolog of yeast ATG6/VPS30 is essential for pollen germination.

Yuki Fujiki, Kohki Yoshimoto, Yoshinori Ohsumi

Open access · greenAbstract read
In one paragraph

Article in Plant physiology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 86 papers.

0numbers the graph read from it
0cells of the map it votes in
86citing papers in PubMed
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

86 citing papers in PubMed, 176 citations in OpenAlex.

  1. Article
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  13. Article
  14. Autophagy in the Lifetime of Plants: From Seed to Seed.International journal of molecular sciences · 2022
    Review
  15. Linking Autophagy to Potential Agronomic Trait Improvement in Crops.International journal of molecular sciences · 2022
    Review
  16. Article
  17. CRISPR/Cas9-Mediated Editing ofFrontiers in plant science · 2022
    Article
  18. Article
  19. Article
  20. Autophagy in Plant Abiotic Stress Management.International journal of molecular sciences · 2021
    Review

26 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Yuki FujikiDepartment of Cell Biology, National Institute for Basic Biology, Okazaki 444-8585, Japan.
Kohki Yoshimoto
Yoshinori Ohsumi
National Institute for Basic Biology · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Yeast (Saccharomyces cerevisiae) Atg6/Vps30 is required for autophagy and the sorting of vacuolar hydrolases, such as carboxypeptidase Y. In higher eukaryotes, however, roles for ATG6/VPS30 homologs in vesicle sorting have remained obscure. Here, we show that AtATG6, an Arabidopsis (Arabidopsis thaliana) homolog of yeast ATG6/VPS30, restored both autophagy and vacuolar sorting of carboxypeptidase Y in a yeast atg6/vps30 mutant. In Arabidopsis cells, green fluorescent protein-AtAtg6 protein localized to punctate structures and colocalized with AtAtg8, a marker protein of the preautophagosomal structure. Disruption of AtATG6 by T-DNA insertion resulted in male sterility that was confirmed by reciprocal crossing experiments. Microscopic analyses of AtATG6 heterozygous plants (AtATG6/atatg6) crossed with the quartet mutant revealed that AtATG6-deficient pollen developed normally, but did not germinate. Because other atatg mutants are fertile, AtAtg6 likely mediates pollen germination in a manner independent of autophagy. We propose that Arabidopsis Atg6/Vps30 functions not only in autophagy, but also plays a pivotal role in pollen germination.

Indexed as

Adaptor Proteins, Vesicular TransportArabidopsisArabidopsis ProteinsAutophagyBeclin-1GerminationGreen Fluorescent ProteinsMolecular Sequence DataMutationPollenProtein TransportRecombinant Fusion ProteinsSaccharomyces cerevisiaeVacuolesAdaptor Proteins, Vesicular TransportArabidopsis ProteinsBeclin-1beclin 1 protein, ArabidopsisGreen Fluorescent ProteinsRecombinant Fusion Proteins

Identifiers

PMID17259285
PMCPMC1820928
OpenAlexW2146094825

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.