Evidence map›Paper›PMID 17259266›Full record

ArticleThe Plant cell2007

empty pericarp4 encodes a mitochondrion-targeted pentatricopeptide repeat protein necessary for seed development and plant growth in maize.

José F Gutiérrez-Marcos, Mauro Dal Prà, Anna Giulini, Liliana M Costa, Giuseppe Gavazzi, Sylvain Cordelier, Olivier Sellam, Christophe Tatout, Wyatt Paul, Pascual Perez and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 64 papers.

0numbers the graph read from it
0cells of the map it votes in
64citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

64 citing papers in PubMed, 125 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Review
  9. Embryo Rescue in Plant Breeding.Plants (Basel, Switzerland) · 2023
    Review
  10. Article
  11. Genetic Localization and Homologous Genes Mining for Barley Grain Size.International journal of molecular sciences · 2023
    Review
  12. Article
  13. Roles of theFrontiers in plant science · 2023
    Article
  14. Review
  15. Article
  16. Fine mapping ofBreeding science · 2022
    Article
  17. Genetic Architecture of Grain Yield-Related Traits in Sorghum and Maize.International journal of molecular sciences · 2022
    Review
  18. Functions of PPR Proteins in Plant Growth and Development.International journal of molecular sciences · 2021
    Review
  19. Fine mapping of a kernel length-related gene with potential value for maize breeding.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021
    Article
  20. EMP32 is required for theRNA biology · 2021
    Article

4 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 3 countries.

José F Gutiérrez-MarcosDepartment of Plant Sciences, University of Oxford, Oxford OX1 3RB, United Kingdom. jose.gutierrez@plants.ox.ac.uk
Mauro Dal Prà
Anna Giulini
Liliana M Costa
Giuseppe Gavazzi
Sylvain Cordelier
Olivier Sellam
Christophe Tatout
Wyatt Paul
Pascual Perez
Hugh G Dickinson
Gabriella Consonni
Biogemma (France) · FRUniversity of Milan · ITUniversity of Oxford · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The pentatricopeptide repeat (PPR) family represents one of the largest gene families in plants, with >440 members annotated in Arabidopsis thaliana. PPR proteins are thought to have a major role in the regulation of posttranscriptional processes in organelles. Recent studies have shown that Arabidopsis PPR proteins play an essential, nonredundant role during embryogenesis. Here, we demonstrate that mutations in empty pericarp4 (emp4), a maize (Zea mays) PPR-encoding gene, confer a seed-lethal phenotype. Mutant endosperms are severely impaired, with highly irregular differentiation of transfer cells in the nutrient-importing basal endosperm. Analysis of homozygous mutant plants generated from embryo-rescue experiments indicated that emp4 also affects general plant growth. The emp4-1 mutation was identified in an active Mutator (Mu) population, and cosegregation analysis revealed that it arose from a Mu3 element insertion. Evidence of emp4 molecular cloning was provided by the isolation of four additional emp4 alleles obtained by a reverse genetics approach. emp4 encodes a novel type of PPR protein of 614 amino acids. EMP4 contains nine 35-amino acid PPR motifs and an N-terminal mitochondrion-targeted sequence peptide, which was confirmed by a translational EMP4-green fluorescent protein fusion that localized to mitochondria. Molecular analyses further suggest that EMP4 is necessary to regulate the correct expression of a small subset of mitochondrial transcripts in the endosperm.

Indexed as

Amino Acid MotifsCloning, MolecularGreen Fluorescent ProteinsMitochondriaMitochondrial ProteinsMolecular Sequence DataMultigene FamilyMutationPhenotypePlant ProteinsRecombinant Fusion ProteinsRNA, MessengerSeedsSequence AlignmentZea maysGreen Fluorescent ProteinsMitochondrial ProteinsPlant ProteinsRecombinant Fusion ProteinsRNA, Messenger

Identifiers

PMID17259266
PMCPMC1820960
OpenAlexW2101326382

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.