Evidence map›Paper›PMID 17256885›Full record

ArticleJournal of proteome research2007

Sulfation, the up-and-coming post-translational modification: its role and mechanism in protein-protein interaction.

Amina S Woods, Hay-Yan J Wang, Shelley N Jackson

Open access · greenAbstract read
In one paragraph

Article in Journal of proteome research, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 36 citations in OpenAlex.

  1. Review
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  12. Review
  13. novPTMenzy: a database for enzymes involved in novel post-translational modifications.Database : the journal of biological databases and curation · 2015
    Article
  14. Imaging of noncovalent complexes by MALDI-MS.Journal of the American Society for Mass Spectrometry · 2013
    Article
  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Amina S WoodsNIDA IRP, NIH, 5500 Nathan Shock Drive, Baltimore, Maryland 21224, USA. awoods@intra.nida.nih.gov
Hay-Yan J Wang
Shelley N Jackson
National Institute on Aging · US

Funding

Intramural NIH HHS Z99 DA999999
6 · The paper itself

Abstract

Tyrosine sulfation is a post-translational modification entailing covalent attachment of sulfate to tyrosine residues. It takes place in the trans-Golgi, is necessary for the bioactivity of some proteins, and improves their ability to interact with other proteins. In the present work, we show that a protein containing a sulfated tyrosine with a delocalized negative charge forms a salt bridge with another protein if it has two or more adjacent arginine residues containing positive delocalized charges. These noncovalent complexes are so stable that, when submitted to collision induced dissociation, the peptides forming the complex dissociate. Just one covalent bond fragments, the covalent bond between the tyrosine oxygen and the SO3 sulfur, and is represented by the appearance of a new peak (basic peptide + SO3), suggesting that in some instances covalent bonds will break down before the noncovalent bonds between the arginine guanidinium and SO3 dissociate. The data implies that the dissociation pathway is preferred; however, fragmentation between tyrosine and the sulfate residue is a major pathway.

Indexed as

Protein Interaction MappingProtein Processing, Post-TranslationalSulfatesArginineProtein BindingSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationStatic ElectricityTandem Mass SpectrometryTyrosineArginineSulfatesTyrosine

Identifiers

PMID17256885
PMCPMC2954651
OpenAlexW1982919615

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.