Evidence map›Paper›PMID 17253879›Full record

ArticleDrug safety2007

Potential use of data-mining algorithms for the detection of 'surprise' adverse drug reactions.

Manfred Hauben, Sebastian Horn, Lester Reich

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Drug safety, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Manfred HaubenRisk Management Strategy, Pfizer Inc., New York, New York, USA.
Sebastian Horn
Lester Reich

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND AND

objectiveVarious data mining algorithms (DMAs) that perform disporportionality analysis on spontaneous reporting system (SRS) data are being heavily promoted to improve drug safety surveillance. The incremental value of DMAs is ultimately related to their ability to detect truly unexpected associations that would have escaped traditional surveillance and/or their ability to identify the same associations as traditional methods but with greater scientific efficiency. As to the former potential benefit, in the course of evaluating DMAs, we have observed what we call 'surprise reactions'. These adverse reactions may be discounted in manual review of adverse drug reaction (ADR) lists because they are less clinically dramatic, less characteristic of drug effects in general, less serious than the classical type B hypersensitivity reactions or may have subtle pharmacological explanations. Thus these reactions may only become recognised when post hoc explanations are sought based on more refined pharmacological knowledge of the formulation. The objective of this study was to explore notions of 'unexpectedness' as relates to signal detection and data mining by introducing the concept of 'surprise reactions' and to determine if the latter associations, often first reported in the literature, represent a type of ADR amenable to detection with the assistance of adjunctive statistical calculations on SRS data.

methodsUsing commonly cited thresholds, the multi-item gamma Poisson shrinker (MGPS) and proportional reporting ratios (PRRs) were applied to reports in the US FDA Adverse Event Reporting System (AERS) database of well documented 'surprise reactions' compiled by the authors.

resultsThere were 34 relevant surprise reactions involving 29 separate drugs in 17 different drug classes. Using PRRs (PRR >2, chi(2) >4, N >2), 12 drug-event combinations were signalled before the first ADR citation appeared in MEDLINE, four occurred concurrently and 11 after. With empirical Bayes geometric mean (EBGM) analysis (EBGM >2, N >0), 12 signals occurred before, three concurrently and 11 after publication of the first literature citation. With EB(05) (EB(05)> or =2, N >0), six occurred before, two concurrently and 14 after MEDLINE citation. DISCUSSION: Pharmacovigilance is rather unique in terms of the number and variety of events under surveillance. Some events may be more appropriate targets for statistical approaches than others. The experience of many organisations is that most statistical disproportionalities represent known associations but our findings suggest there could be events that may be discounted on manual review of adverse event lists, which may be usefully highlighted via DMAs.

conclusionsIdentification of surprise reactions may serve as an important niche for DMAs.

Indexed as

AlgorithmsDrug-Related Side Effects and Adverse ReactionsAdverse Drug Reaction Reporting SystemsBayes TheoremData Interpretation, StatisticalHumansModels, StatisticalPoisson DistributionResearch DesignUnited StatesUnited States Food and Drug Administration

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.