Evidence map›Paper›PMID 17250765›Full record

ArticleBMC genomics2007

Identification of rat lung-specific microRNAs by micoRNA microarray: valuable discoveries for the facilitation of lung research.

Yang Wang, Tingting Weng, Deming Gou, Zhongming Chen, Narendranath Reddy Chintagari, Lin Liu

Abstract read
In one paragraph

Article in BMC genomics, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. MiR-196a regulates heme oxygenase-1 by silencing Bach1 in the neonatal mouse lung.American journal of physiology. Lung cellular and molecular physiology · 2016
    Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. MicroRNA-126-mediated control of cell fate in B-cell myeloid progenitors as a potential alternative to transcriptional factors.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Yang WangDepartment of Physiological Sciences, Oklahoma State University, Stillwater, OK 74078, USA. yang.wang@okstate.edu <yang.wang@okstate.edu>
Tingting Weng
Deming Gou
Zhongming Chen
Narendranath Reddy Chintagari
Lin Liu

Funding

MOLECULAR MECHANISMS OF LUNG SURFACTANT SECRETIONR01HL052146 · NHLBI · OKLAHOMA STATE UNIVERSITY STILLWATER · PI LIU, LIN · 2000 to 2007
$2.3M
Mechanisms of Alveolar Fluid TransportR01HL083188 · NHLBI · OKLAHOMA STATE UNIVERSITY STILLWATER · PI LIU, LIN · 2006 to 2009
$1.4M
Mechanisms of Alveolar Epithelial Cell DifferentiationR01HL071628 · NHLBI · OKLAHOMA STATE UNIVERSITY STILLWATER · PI LIU, LIN · 2003 to 2006
$1.2M
NHLBI NIH HHS R01 HL-052146NHLBI NIH HHS R01 HL052146NHLBI NIH HHS R01 HL-071628NHLBI NIH HHS R01 HL071628NHLBI NIH HHS R01 HL-083188NHLBI NIH HHS R01 HL083188
6 · The paper itself

Abstract

backgroundAn important mechanism for gene regulation utilizes small non-coding RNAs called microRNAs (miRNAs). These small RNAs play important roles in tissue development, cell differentiation and proliferation, lipid and fat metabolism, stem cells, exocytosis, diseases and cancers. To date, relatively little is known about functions of miRNAs in the lung except lung cancer.

resultsIn this study, we utilized a rat miRNA microarray containing 216 miRNA probes, printed in-house, to detect the expression of miRNAs in the rat lung compared to the rat heart, brain, liver, kidney and spleen. Statistical analysis using Significant Analysis of Microarray (SAM) and Tukey Honestly Significant Difference (HSD) revealed 2 miRNAs (miR-195 and miR-200c) expressed specifically in the lung and 9 miRNAs co-expressed in the lung and another organ. 12 selected miRNAs were verified by Northern blot analysis.

conclusionThe identified lung-specific miRNAs from this work will facilitate functional studies of miRNAs during normal physiological and pathophysiological processes of the lung.

Indexed as

AnimalsBlotting, NorthernHumansLungLung NeoplasmsMicroRNAsNucleic Acid HybridizationOligonucleotide Array Sequence AnalysisRatsReproducibility of ResultsRNA, MessengerSensitivity and SpecificityMicroRNAsRNA, Messenger

Identifiers

PMID17250765
PMCPMC1790902

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.