Evidence map›Paper›PMID 17242860›Full record

ArticleMammalian genome : official journal of the International Mammalian Genome Society2007

IL-1 family members as candidate genes modulating scrapie susceptibility in sheep: localization, partial characterization, and expression.

Ane Marcos-Carcavilla, Jorge H Calvo, Carmen González, Katayoun Moazami-Goudarzi, Pascal Laurent, Maud Bertaud, Hélène Hayes, Anne E Beattie, Carmen Serrano, Jaber Lyahyai and 5 more

Abstract read
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In one paragraph

Article in Mammalian genome : official journal of the International Mammalian Genome Society, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.3field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 11 citations in OpenAlex.

  1. Frontiers in veterinary science · 2024
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  9. A critical analysis of disease-associated DNA polymorphisms in the genes of cattle, goat, sheep, and pig.Mammalian genome : official journal of the International Mammalian Genome Society · 2008
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 6 institutions in 3 countries.

Ane Marcos-CarcavillaDepartamento de Mejora Genética Animal, INIA, Ctra La Coruña Km 7.5, 28040, Madrid, Spain. amarcos@inia.es
Jorge H Calvo
Carmen González
Katayoun Moazami-Goudarzi
Pascal Laurent
Maud Bertaud
Hélène Hayes
Anne E Beattie
Carmen Serrano
Jaber Lyahyai
Inmaculada Martín-Burriel
Estefânia Alves
Pilar Zaragoza
Juan J Badiola
Magdalena Serrano
Département Génétique Animale · FRUniversidad de Zaragoza · ESAgResearch · NZCentro de Investigación y Tecnología Agroalimentaria de Aragón · ESHospital Universitario Miguel Servet · ESInstituto Nacional de Investigación y Tecnología Agraria y Alimentaria · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Scrapie (SC) is a transmissible spongiform encephalopathy (TSE) in sheep and goats. Susceptibility to this neurodegenerative disease is controlled mainly by point mutations at the PRNP locus. Other genes, apart from PRNP, have been reported to modulate resistance/susceptibility to SC. On the basis of several studies on Alzheimer's disease and different TSE models, and of requirement for correct homeostasis of cytokines in brain, IL1B and IL1RN were chosen as putative positional and functional candidate genes that might be involved in the polygenic variance mentioned above. In the present work, ovine IL1B and IL1RN genes were partially isolated and characterized, including promoter and other regulatory regions. In addition, several sequence polymorphisms were identified. Furthermore, their cytogenetic positions on sheep chromosomes were determined by FISH and confirmed by linkage analysis, localizing both genes in OAR3p22, a region previously described as carrying a QTL for SC incubation period in sheep. Finally, expression analyses were carried out in eight naturally SC-infected and five uninfected sheep with the same genotype for PRNP (ARQ/ARQ). This comparison was performed using real-time RT-PCR in samples of spleen and cerebellum. Results showed differences in the expression of both cytokines in cerebellum (p < 0.05) but not in spleen (p > 0.05).

Indexed as

AnimalsBase SequenceCerebellumChromosome MappingDNA, ComplementaryDNA PrimersGene ExpressionGenetic Predisposition to DiseaseInterleukin-1Interleukin-1betaInterleukin 1 Receptor Antagonist ProteinMolecular Sequence DataPolymorphism, GeneticPrionsRNA, MessengerScrapieDNA, ComplementaryDNA PrimersInterleukin-1Interleukin-1betaInterleukin 1 Receptor Antagonist ProteinPrionsRNA, Messenger

Identifiers

PMID17242860
OpenAlexW2052688094

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.