Evidence map›Paper›PMID 17242181›Full record

ArticleMolecular and cellular biology2007

Inverted DNA repeats channel repair of distant double-strand breaks into chromatid fusions and chromosomal rearrangements.

Kelly VanHulle, Francene J Lemoine, Vidhya Narayanan, Brandon Downing, Krista Hull, Christy McCullough, Melissa Bellinger, Kirill Lobachev, Thomas D Petes, Anna Malkova

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 73 papers.

0numbers the graph read from it
0cells of the map it votes in
73citing papers in PubMed
5.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

73 citing papers in PubMed, 103 citations in OpenAlex.

  1. Review
  2. Assessment and Mitigation of CRISPR-Cas9-Induced Nontargeted Translocations.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Break-induced replication: unraveling each step.Trends in genetics : TIG · 2022
    Review
  9. Review
  10. Break-induced replication mechanisms in yeast and mammals.Current opinion in genetics & development · 2021
    Review
  11. Repair of DNA Breaks by Break-Induced Replication.Annual review of biochemistry · 2021
    Review
  12. Single-Strand Annealing in Cancer.International journal of molecular sciences · 2021
    Review
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Review
  19. Break induced replication in eukaryotes: mechanisms, functions, and consequences.Critical reviews in biochemistry and molecular biology · 2017
    Review
  20. Article

13 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Kelly VanHulleBiology Department, Indiana University/Purdue University Indiana, 723 West Michigan Street, Indianapolis, IN 46202-5132, USA.
Francene J Lemoine
Vidhya Narayanan
Brandon Downing
Krista Hull
Christy McCullough
Melissa Bellinger
Kirill Lobachev
Thomas D Petes
Anna Malkova
Duke University · USGeorgia Institute of Technology · US

Funding

RECOMBINATION IN YEASTR01GM024110 · NIGMS · UNIVERSITY OF NORTH CAROLINA CHAPEL HILL · PI PETES, THOMAS · 1985 to 2015
$6.1M
Recombination Mechanisms in Yeast Cell DifferentiationR37GM020056 · NIGMS · BRANDEIS UNIVERSITY · PI HABER, JAMES E · 2007 to 2016
$5.5M
INSTABILITY OF SIMPLE REPETITIVE DNA SEQUENCES IN YEASTR01GM052319 · NIGMS · UNIVERSITY OF NORTH CAROLINA CHAPEL HILL · PI PETES, THOMAS · 1995 to 2015
$4.9M
RECOMBINATION MECHANISMS IN YEAST CELL DIFFERENTIATIONR01GM020056 · NIGMS · BRANDEIS UNIVERSITY · PI HABER, JAMES E · 1985 to 2006
$3.4M
Mechanism of break-induced replication in yeastR15GM074657 · NIGMS · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI MALKOVA, ANNA L · 2006 to 2006
$261k
NIGMS NIH HHS 1R15 GM 074657-01A1NIGMS NIH HHS GM 20056NIGMS NIH HHS GM 24110NIGMS NIH HHS GM 52319NIGMS NIH HHS R01 GM020056NIGMS NIH HHS R01 GM024110NIGMS NIH HHS R01 GM052319NIGMS NIH HHS R15 GM074657NIGMS NIH HHS R37 GM020056
6 · The paper itself

Abstract

Inverted DNA repeats are known to cause genomic instabilities. Here we demonstrate that double-strand DNA breaks (DSBs) introduced a large distance from inverted repeats in the yeast (Saccharomyces cerevisiae) chromosome lead to a burst of genomic instability. Inverted repeats located as far as 21 kb from each other caused chromosome rearrangements in response to a single DSB. We demonstrate that the DSB initiates a pairing interaction between inverted repeats, resulting in the formation of large dicentric inverted dimers. Furthermore, we observed that propagation of cells containing inverted dimers led to gross chromosomal rearrangements, including translocations, truncations, and amplifications. Finally, our data suggest that break-induced replication is responsible for the formation of translocations resulting from anaphase breakage of inverted dimers. We propose a model explaining the formation of inverted dicentric dimers by intermolecular single-strand annealing (SSA) between inverted DNA repeats. According to this model, anaphase breakage of inverted dicentric dimers leads to gross chromosomal rearrangements (GCR). This "SSA-GCR" pathway is likely to be important in the repair of isochromatid breaks resulting from collapsed replication forks, certain types of radiation, or telomere aberrations that mimic isochromatid breaks.

Indexed as

Chromosome AberrationsDNA Breaks, Double-StrandedDNA RepairModels, GeneticRepetitive Sequences, Nucleic AcidAnaphaseChromatidsChromosomes, FungalDimerizationDNA ReplicationDNA, Single-StrandedGenomic InstabilitySaccharomyces cerevisiaeTranslocation, GeneticDNA, Single-Stranded

Identifiers

PMID17242181
PMCPMC1899885
OpenAlexW2159045947

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.