Evidence map›Paper›PMID 17229834›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2007

Increased apoptosis, p53 up-regulation, and cerebellar neuronal degeneration in repair-deficient Cockayne syndrome mice.

R R Laposa, E J Huang, J E Cleaver

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 89 citations in OpenAlex.

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  6. The ARK2N-CK2 complex initiates transcription-coupled repair through enhancing the interaction of CSB with lesion-stalled RNAPII.Proceedings of the National Academy of Sciences of the United States of America · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

R R LaposaDepartment of Dermatology and Cancer Center, University of California, San Francisco, CA 94143-0808, USA.
E J Huang
J E Cleaver
University of California, San Francisco · US

Funding

Translational InformaticsP30CA082103 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Kate Taylor Shumate · 1999 to 2026
$209.7M
XP VARIANT--A HUMAN MUTATOR GENE FOR UV DAMAGER01ES008061 · NIEHS · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI CLEAVER, JAMES E · 1998 to 2005
$1.8M
Signaling pathways of HIPK2 in neuronal apoptosisR01NS048393 · NINDS · NORTHERN CALIFORNIA INSTITUTE RES &EDUC · PI HUANG, ERIC J · 2005 to 2009
$1.5M
DNA Damage and Neurodegeneration in Cockayne SyndromeR01NS052781 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI CLEAVER, JAMES E · 2006 to 2009
$1.4M
Molecular Mechanisms of Sensory NeurogenesisK02NS044223 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI HUANG, ERIC J · 2002 to 2006
$844k
NCI NIH HHS 1 F32 CA099499-01A1NCI NIH HHS P30 CA082103NCI NIH HHS P30 CA82103NIEHS NIH HHS 1 R01 ES 8061NIEHS NIH HHS R01 ES008061NINDS NIH HHS 1R01NS052781NINDS NIH HHS K02 NS044223NINDS NIH HHS NS44223NINDS NIH HHS NS48393NINDS NIH HHS R01 NS048393NINDS NIH HHS R01 NS052781
6 · The paper itself

Abstract

Cockayne syndrome (CS) is a rare recessive childhood-onset neurodegenerative disease, characterized by a deficiency in the DNA repair pathway of transcription-coupled nucleotide excision repair. Mice with a targeted deletion of the CSB gene (Csb-/-) exhibit a much milder ataxic phenotype than human patients. Csb-/- mice that are also deficient in global genomic repair [Csb-/-/xeroderma pigmentosum C (Xpc)-/-] are more profoundly affected, exhibiting whole-body wasting, ataxia, and neural loss by postnatal day 21. Cerebellar granule cells demonstrated high TUNEL staining indicative of apoptosis. Purkinje cells, identified by the marker calbindin, were severely depleted and, although not TUNEL-positive, displayed strong immunoreactivity for p53, indicating cellular stress. A subset of animals heterozygous for Csb and Xpc deficiencies was more mildly affected, demonstrating ataxia and Purkinje cell loss at 3 months of age. Mouse, Csb-/-, and Xpc-/- embryonic fibroblasts each exhibited increased sensitivity to UV light, which generates bulky DNA damage that is a substrate for excision repair. Whereas Csb-/-/Xpc-/- fibroblasts were more UV-sensitive than either single knockout, double-heterozygote fibroblasts had normal UV sensitivity. Csb-/- mice crossed with a strain defective in base excision repair (Ogg1) demonstrated no enhanced neurodegenerative phenotype. Complete deficiency in nucleotide excision repair therefore renders the brain profoundly sensitive to neurodegeneration in specific cell types of the cerebellum, possibly because of unrepaired endogenous DNA damage that is a substrate for nucleotide but not base excision repair.

Indexed as

DNA RepairUp-RegulationAnimalsApoptosisCerebellumCockayne SyndromeDNA Repair EnzymesImmunohistochemistryMiceNeuronsPoly-ADP-Ribose Binding ProteinsTumor Suppressor Protein p53Ultraviolet RaysDNA Repair EnzymesErcc6 protein, mousePoly-ADP-Ribose Binding ProteinsTumor Suppressor Protein p53

Identifiers

PMID17229834
PMCPMC1783131
OpenAlexW2106191623

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.