Evidence map›Paper›PMID 17229696›Full record

ArticleJournal of virology2007

Mutations that decrease DNA binding of the processivity factor of the herpes simplex virus DNA polymerase reduce viral yield, alter the kinetics of viral DNA replication, and decrease the fidelity of DNA replication.

Changying Jiang, Ying T Hwang, John C W Randell, Donald M Coen, Charles B C Hwang

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 28 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Herpes simplex viruses: mechanisms of DNA replication.Cold Spring Harbor perspectives in biology · 2012
    Review
  6. Article
  7. Article
  8. Article
  9. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Changying JiangDepartment of Microbiology and Immunology, State University of New York, Upstate Medical University, 750 E. Adams St., Syracuse, NY 13210, USA.
Ying T Hwang
John C W Randell
Donald M Coen
Charles B C Hwang
SUNY Upstate Medical University · USHarvard University · US

Funding

MOLECULAR GENETICS OF HSV DNA POLYMERASE GENER01AI019838 · NIAID · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI COEN, DONALD M, HOGLE, JAMES M · 1985 to 2015
$5.9M
Fidelity of Herpes Simplex Virus DNA ReplicationR01AI056359 · NIAID · UPSTATE MEDICAL UNIVERSITY · PI HWANG, CHARLES BIH-CHEN · 2004 to 2008
$1.4M
Molecular Genetics of HSV DNA Polymerase GeneR56AI019838 · NIAID · HARVARD MEDICAL SCHOOL · PI COEN, DONALD M · 2017 to 2017
$624k
Fidelity of Herpes Simplex Virus DNA ReplicationR21AI056359 · NIAID · UPSTATE MEDICAL UNIVERSITY · PI HWANG, CHARLES BIH-CHEN · 2003 to 2003
$334k
NIAID NIH HHS AI 056359NIAID NIH HHS R01 AI019838NIAID NIH HHS R01 AI056359NIAID NIH HHS R21 AI056359NIAID NIH HHS R56 AI019838
6 · The paper itself

Abstract

The processivity subunit of the herpes simplex virus DNA polymerase, UL42, is essential for viral replication and possesses both Pol- and DNA-binding activities. Previous studies demonstrated that the substitution of alanine for each of four arginine residues, which reside on the positively charged surface of UL42, resulted in decreased DNA binding affinity and a decreased ability to synthesize long-chain DNA by the polymerase. In this study, the effects of each substitution on the production of viral progeny, viral DNA replication, and DNA replication fidelity were examined. Each substitution mutant was able to complement the replication of a UL42 null mutant in transient complementation assays and to support the replication of plasmid DNA containing herpes simplex virus type 1 (HSV-1) origin sequences in transient DNA replication assays. Mutant viruses containing each substitution and a lacZ insertion in a nonessential region of the genome were constructed and characterized. In single-cycle growth assays, the mutants produced significantly less progeny virus than the control virus containing wild-type UL42. Real-time PCR assays revealed that these UL42 mutants synthesized less viral DNA during the early phase of infection. Interestingly, during the late phase of infection, the mutant viruses synthesized larger amounts of viral DNA than the control virus. The frequencies of mutations of the virus-borne lacZ gene increased significantly in the substitution mutants compared to those observed for the control virus. These results demonstrate that the reduced DNA binding of UL42 is associated with significant effects on virus yields, viral DNA replication, and replication fidelity. Thus, a processivity factor can influence replication fidelity in mammalian cells.

Indexed as

AnimalsChlorocebus aethiopsDNA-Directed DNA PolymeraseDNA, RecombinantDNA ReplicationDNA, ViralExodeoxyribonucleasesHerpesvirus 1, HumanKineticsLac OperonMutationVero CellsViral ProteinsDNA-Directed DNA PolymeraseDNA polymerase, SimplexvirusDNA, RecombinantDNA, ViralExodeoxyribonucleasesViral Proteins

Identifiers

PMID17229696
PMCPMC1866068
OpenAlexW2020936133

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.