Evidence map›Paper›PMID 17229474›Full record

ArticleBiochimica et biophysica acta2007

Functional characterization of APOBEC-1 complementation factor phosphorylation sites.

David M Lehmann, Chad A Galloway, Celeste MacElrevey, Mark P Sowden, Joseph E Wedekind, Harold C Smith

Open access · greenAbstract read
In one paragraph

Article in Biochimica et biophysica acta, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.5field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Review
  3. Functions and regulation of the APOBEC family of proteins.Seminars in cell & developmental biology · 2012
    Review
  4. Article
  5. APOBEC-1 complementation factor (ACF) forms RNA-dependent multimers.Biochemical and biophysical research communications · 2010
    Article
  6. Article
  7. Article
  8. Review
  9. APOBEC-1 Complementation Factor: From RNA Binding to Cancer.Cancer control : journal of the Moffitt Cancer Center
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

David M LehmannEnvironmental Health Sciences Center, Department of Toxicology, University of Rochester, Rochester, NY 14642, USA.
Chad A Galloway
Celeste MacElrevey
Mark P Sowden
Joseph E Wedekind
Harold C Smith
University of Rochester · US

Funding

Training in Environment ToxicologyT32ES007026 · NIEHS · UNIVERSITY OF ROCHESTER · PI Alison Elder, Marissa Sobolewski Terry · 1985 to 2026
$20.2M
Mechanisms of Action On Non-Coding RNA MoleculesR01GM063162 · NIGMS · UNIVERSITY OF ROCHESTER · PI WEDEKIND, JOSEPH E · 2001 to 2024
$6.8M
Training in Cellular, Biochemical and Molecular SciencesT32GM068411 · NIGMS · UNIVERSITY OF ROCHESTER · PI MAQUAT, LYNNE E · 2005 to 2019
$3.9M
METABOLIC REGULATION OF APOLIPOPROTEIN B MRNA EDITINGR01DK043739 · NIDDK · UNIVERSITY OF ROCHESTER · PI SMITH, HAROLD C · 1992 to 2003
$1.1M
DETECTOR &GENERATOR FOR CRYSTALLOGRAPHY CORE FACILITYS10RR015934 · NCRR · ROSALIND FRANKLIN UNIV OF MEDICINE &SCI · PI WEDEKIND, JOSEPH E · 2001 to 2001
$369k
NCRR NIH HHS RR15934NIDDK NIH HHS DK43739NIDDK NIH HHS R01 DK043739NIEHS NIH HHS 5T32 ES07026NIEHS NIH HHS T32 ES007026NIGMS NIH HHS 5T32 GM068411NIGMS NIH HHS GM63162NIGMS NIH HHS R01 GM063162NIGMS NIH HHS T32 GM068411
6 · The paper itself

Abstract

ApoB mRNA editing involves site-specific deamination of cytidine 6666 producing an in-frame translation stop codon. Editing minimally requires APOBEC-1 and APOBEC-1 complementation factor (ACF). Metabolic stimulation of apoB mRNA editing in hepatocytes is associated with serine phosphorylation of ACF localized to editing competent, nuclear 27S editosomes. We demonstrate that activation of protein kinase C (PKC) stimulated editing and enhanced ACF phosphorylation in rat primary hepatocytes. Conversely, activation of protein kinase A (PKA) had no effect on editing. Recombinant PKC efficiently phosphorylated purified ACF64 protein in vitro, whereas PKA did not. Mutagenesis of predicted PKC phosphorylation sites S154 and S368 to alanine inhibited ethanol-stimulated induction of editing suggesting that these sites function in the metabolic regulation of editing. Consistent with this interpretation, substitution of S154 and S368 with aspartic acid stimulated editing to levels comparable to ethanol treatment in control McArdle RH7777 cells. These data suggest that phosphorylation of ACF by PKC may be a key regulatory mechanism of apoB mRNA editing in rat hepatocytes.

Indexed as

Amino Acid SequenceAnimalsApolipoproteins BCells, CulturedEnzyme ActivationHepatocytesHeterogeneous-Nuclear RibonucleoproteinsHumansMaleModels, MolecularMolecular Sequence DataMutagenesis, Site-DirectedPhosphorylationProtein KinasesProtein Structure, TertiaryRatsAPOBEC-1 complementation factor, ratApolipoproteins BHeterogeneous-Nuclear RibonucleoproteinsProtein KinasesRNA, Messenger

Identifiers

PMID17229474
PMCPMC1847399
OpenAlexW2143340572

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.