Evidence map›Paper›PMID 17222884›Full record

ArticleVirology2007

Membrane topology of murine coronavirus replicase nonstructural protein 3.

Amornrat Kanjanahaluethai, Zhongbin Chen, Dalia Jukneliene, Susan C Baker

Open access · greenAbstract read
In one paragraph

Article in Virology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 76 papers.

0numbers the graph read from it
0cells of the map it votes in
76citing papers in PubMed
13.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

76 citing papers in PubMed, 103 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. COVID-19 Therapeutic Potential of Natural Products.International journal of molecular sciences · 2023
    Review
  7. Review
  8. Ligand-based design, synthesis, computational insights, andJournal of enzyme inhibition and medicinal chemistry · 2022
    Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. The Molecular Virology of Coronaviruses with Special Reference to SARS-CoV-2.Advances in experimental medicine and biology · 2021
    Review
  17. Article
  18. Review
  19. Article
  20. Review

16 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 3 countries.

Amornrat KanjanahaluethaiDepartment of Microbiology and Immunology, Loyola University of Chicago, Stritch School of Medicine, Maywood, IL 60153, USA.
Zhongbin Chen
Dalia Jukneliene
Susan C Baker
Loyola University Chicago · US

Funding

STRUCTURE AND FUNCTION OF THE CORONAVIRUS REPLICASER01AI045798 · NIAID · LOYOLA UNIVERSITY CHICAGO · PI BAKER, SUSAN C. · 2001 to 2005
$1.5M
NIAID NIH HHS AI 45798NIAID NIH HHS R01 AI045798
6 · The paper itself

Abstract

Mouse hepatitis virus (MHV) is a member of the family Coronaviridae. These positive strand RNA viruses encode a replicase polyprotein that is processed into 16 nonstructural proteins (nsps). The nsps assemble with membranes to generate double membrane vesicles, which are the sites of viral RNA synthesis. MHV nsp3 contains multiple domains including two papain-like protease domains, PLP1 and PLP2, and a predicted transmembrane (TM) domain. In this study, we determined the membrane topology of nsp3-TM and showed that TM-mediated tethering of PLP2 is important for processing at cleavage site 3. Biochemical analysis revealed that nsp3 is an integral membrane protein that is inserted into the endoplasmic reticulum (ER) membranes co-translationally and glycosylated at asparagine-2357. Proteinase K digestion experiments indicate that the TM domain of nsp3 has 4 membrane-spanning helices. We show that nsp3-TM is sufficient in mediating ER membrane association of a cytosolic protein. This study is the first detailed analysis of the topology and function of the coronavirus nsp3 TM domain.

Indexed as

AsparagineBlotting, WesternCell MembraneEndoplasmic ReticulumGlycosylationHeLa CellsHumansImmunoprecipitationMurine hepatitis virusProtein Structure, TertiaryRNA-Dependent RNA PolymeraseViral Nonstructural ProteinsAsparaginenonstructural protein, coronavirusRNA-Dependent RNA PolymeraseViral Nonstructural Proteins

Identifiers

PMID17222884
PMCPMC1925034
OpenAlexW2048627201

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.