Evidence map›Paper›PMID 17220270›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2007

Serum proteome profiling detects myelodysplastic syndromes and identifies CXC chemokine ligands 4 and 7 as markers for advanced disease.

Manuel Aivado, Dimitrios Spentzos, Ulrich Germing, Gil Alterovitz, Xiao-Ying Meng, Franck Grall, Aristoteles A N Giagounidis, Giannoula Klement, Ulrich Steidl, Hasan H Otu and 10 more

Open access · greenAbstract readMulticenter Study
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 89 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

20 authors at 7 institutions in 4 countries.

Manuel AivadoProteomics Core and Department of Medical Oncology, Dana-Farber/Harvard Cancer Center, Boston, MA 02115, USA.
Dimitrios Spentzos
Ulrich Germing
Gil Alterovitz
Xiao-Ying Meng
Franck Grall
Aristoteles A N Giagounidis
Giannoula Klement
Ulrich Steidl
Hasan H Otu
Akos Czibere
Wolf C Prall
Christof Iking-Konert
Michelle Shayne
Marco F Ramoni
Norbert Gattermann
Rainer Haas
Constantine S Mitsiades
Eric T Fung
Towia A Libermann
Genomics (United Kingdom) · GBHarvard University Press · USBoston Children's Hospital · USDana-Farber/Harvard Cancer Center · USHarvard University · USHeinrich Heine University Düsseldorf · DEYeditepe University · TR

Funding

NIDDK BIOTECHNOLOGY CENTERU24DK058739 · NIDDK · BETH ISRAEL DEACONESS MEDICAL CENTER · PI LIBERMANN, TOWIA A · 2000 to 2002
$1.6M
ROLE OF A NEW ETS FACTOR, PDEF, IN PROSTATE CANCERR01CA085467 · NCI · BETH ISRAEL DEACONESS MEDICAL CENTER · PI LIBERMANN, TOWIA A · 2001 to 2005
$1.3M
NCI NIH HHS 1R01 CA 85467NCI NIH HHS R01 CA085467NIDDK NIH HHS U24 DK 58739
6 · The paper itself

Abstract

Myelodysplastic syndromes (MDS) are among the most frequent hematologic malignancies. Patients have a short survival and often progress to acute myeloid leukemia. The diagnosis of MDS can be difficult; there is a paucity of molecular markers, and the pathophysiology is largely unknown. Therefore, we conducted a multicenter study investigating whether serum proteome profiling may serve as a noninvasive platform to discover novel molecular markers for MDS. We generated serum proteome profiles from 218 individuals by MS and identified a profile that distinguishes MDS from non-MDS cytopenias in a learning sample set. This profile was validated by testing its ability to predict MDS in a first independent validation set and a second, prospectively collected, independent validation set run 5 months apart. Accuracy was 80.5% in the first and 79.0% in the second validation set. Peptide mass fingerprinting and quadrupole TOF MS identified two differential proteins: CXC chemokine ligands 4 (CXCL4) and 7 (CXCL7), both of which had significantly decreased serum levels in MDS, as confirmed with independent antibody assays. Western blot analyses of platelet lysates for these two platelet-derived molecules revealed a lack of CXCL4 and CXCL7 in MDS. Subtype analyses revealed that these two proteins have decreased serum levels in advanced MDS, suggesting the possibility of a concerted disturbance of transcription or translation of these chemokines in advanced MDS.

Indexed as

ProteomeBiomarkersBlood ProteinsChemokines, CXCHumansMass SpectrometryMyelodysplastic SyndromesBiomarkersBlood ProteinsChemokines, CXCProteome

Identifiers

PMID17220270
PMCPMC1783137
OpenAlexW2048040326

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.