Evidence map›Paper›PMID 17220249›Full record

ArticleApplied and environmental microbiology2007

Redirection of metabolism for biological hydrogen production.

Federico E Rey, Erin K Heiniger, Caroline S Harwood

Open access · greenAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed
13.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed, 164 citations in OpenAlex.

  1. Article
  2. Nitrogenase regulation inbioRxiv : the preprint server for biology · 2026
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  9. Photosynthetic biohybrid coculture for tandem and tunable COProceedings of the National Academy of Sciences of the United States of America · 2022
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  12. Characteristics and Application ofFrontiers in bioengineering and biotechnology · 2022
    Review
  13. Review
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  16. Review
  17. Article
  18. Review
  19. Article
  20. Phototrophic Lactate Utilization byApplied and environmental microbiology · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Federico E ReyDepartment of Microbiology, Box 357242, 1959 N. E. Pacific Street, University of Washington, Seattle, WA 98195-7242, USA.
Erin K Heiniger
Caroline S Harwood
University of Washington · USUniversity of Iowa · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A major route for hydrogen production by purple photosynthetic bacteria is biological nitrogen fixation. Nitrogenases reduce atmospheric nitrogen to ammonia with the concomitant obligate production of molecular hydrogen. However, hydrogen production in the context of nitrogen fixation is a rather inefficient process because about 75% of the reductant consumed by the nitrogenase is used to generate ammonia. In this study we describe a selection strategy to isolate strains of purple photosynthetic bacteria in which hydrogen production is necessary for growth and independent of nitrogen fixation. We obtained four mutant strains of the photosynthetic bacterium Rhodopseudomonas palustris that produce hydrogen constitutively, even in the presence of ammonium, a condition where wild-type cells do not accumulate detectable amounts of hydrogen. Some of these strains produced up to five times more hydrogen than did wild-type cells growing under nitrogen-fixing conditions. Transcriptome analyses of the hydrogen-producing mutant strains revealed that in addition to the nitrogenase genes, 18 other genes are potentially required to produce hydrogen. The mutations that caused constitutive hydrogen production mapped to four different sites in the NifA transcriptional regulator in the four different strains. The strategy presented here can be applied to the large number of diverse species of anoxygenic photosynthetic bacteria that are known to exist in nature to identify strains for which there are fitness incentives to produce hydrogen.

Indexed as

Gene Expression Regulation, BacterialBacterial ProteinsHydrogenMolecular Sequence DataMutationNitrogenaseNitrogen FixationOligonucleotide Array Sequence AnalysisPhotosynthesisProteomeQuaternary Ammonium CompoundsRhodopseudomonasSequence Analysis, DNATranscription, GeneticBacterial ProteinsHydrogenNitrogenaseProteomeQuaternary Ammonium Compounds

Identifiers

PMID17220249
PMCPMC1828789
OpenAlexW2115954298

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.