Evidence map›Paper›PMID 17213321›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2007

The SCL transcriptional network and BMP signaling pathway interact to regulate RUNX1 activity.

John E Pimanda, Ian J Donaldson, Marella F T R de Bruijn, Sarah Kinston, Kathy Knezevic, Liz Huckle, Sandie Piltz, Josette-Renée Landry, Anthony R Green, David Tannahill and 1 more

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
5.1field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 115 citations in OpenAlex.

  1. Article
  2. Article
  3. The evolving hematopoietic niche during development.Frontiers in molecular biosciences · 2024
    Review
  4. Article
  5. Article
  6. Mesoderm-derived PDGFRANature cell biology · 2022
    Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Dissecting BMP signaling input into the gene regulatory networks driving specification of the blood stem cell lineage.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  13. Article
  14. Article
  15. Article
  16. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

John E PimandaCambridge Institute for Medical Research, University of Cambridge, Cambridge CB2 2XY, United Kingdom.
Ian J Donaldson
Marella F T R de Bruijn
Sarah Kinston
Kathy Knezevic
Liz Huckle
Sandie Piltz
Josette-Renée Landry
Anthony R Green
David Tannahill
Berthold Göttgens
University of Cambridge · GBWellcome Sanger Institute · GBJohn Radcliffe Hospital · GB

Funding

Medical Research Council MC_U137970202Wellcome Trust
6 · The paper itself

Abstract

Hematopoietic stem cell (HSC) development is regulated by several signaling pathways and a number of key transcription factors, which include Scl/Tal1, Runx1, and members of the Smad family. However, it remains unclear how these various determinants interact. Using a genome-wide computational screen based on the well characterized Scl +19 HSC enhancer, we have identified a related Smad6 enhancer that also targets expression to blood and endothelial cells in transgenic mice. Smad6, Bmp4, and Runx1 transcripts are concentrated along the ventral aspect of the E10.5 dorsal aorta in the aorta-gonad-mesonephros region from which HSCs originate. Moreover, Smad6, an inhibitor of Bmp4 signaling, binds and inhibits Runx1 activity, whereas Smad1, a positive mediator of Bmp4 signaling, transactivates the Runx1 promoter. Taken together, our results integrate three key determinants of HSC development; the Scl transcriptional network, Runx1 activity, and the Bmp4/Smad signaling pathway.

Indexed as

Signal TransductionAnimalsBase SequenceBasic Helix-Loop-Helix ProteinsBone Morphogenetic Protein 4Bone Morphogenetic ProteinsComputational BiologyConserved SequenceCore Binding Factor Alpha 2 SubunitEmbryo, MammalianEndothelial CellsGene Expression Regulation, DevelopmentalGene Regulatory NetworksHumansMiceMice, TransgenicBasic Helix-Loop-Helix ProteinsBMP4 protein, humanBmp4 protein, mouseBone Morphogenetic Protein 4Bone Morphogenetic ProteinsCore Binding Factor Alpha 2 SubunitProto-Oncogene ProteinsSmad6 Protein

Identifiers

PMID17213321
PMCPMC1783401
OpenAlexW2055768277

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.