Evidence map›Paper›PMID 17212810›Full record

ArticleRetrovirology2007

Crystal structure of an FIV/HIV chimeric protease complexed with the broad-based inhibitor, TL-3.

Holly Heaslet, Ying-Chuan Lin, Karen Tam, Bruce E Torbett, John H Elder, C David Stout

Open access · goldAbstract read
In one paragraph

Article in Retrovirology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.9field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 42 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. FIV Gag: virus assembly and host-cell interactions.Veterinary immunology and immunopathology · 2010
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Holly HeasletPfizer Global Research & Development, 2800 Plymouth Rd., Ann Arbor, MI 48105, USA. hheaslet@scripps.edu
Ying-Chuan Lin
Karen Tam
Bruce E Torbett
John H Elder
C David Stout
Scripps Research Institute · USPfizer (United States) · US

Funding

STRUCTURAL STUDIES OF FIV PROTEASE INHIBITOR COMPLEXESP01GM048870 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI OLSON, ARTHUR J. · 1992 to 2007
$10.3M
Substrate/Inhibitor Specificity of FIV and HIV PRsR01AI040882 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI ELDER, JOHN H · 1997 to 2006
$1.6M
NIAID NIH HHS AI40882NIAID NIH HHS R01 AI040882NIGMS NIH HHS GM48870NIGMS NIH HHS P01 GM048870
6 · The paper itself

Abstract

We have obtained the 1.7 A crystal structure of FIV protease (PR) in which 12 critical residues around the active site have been substituted with the structurally equivalent residues of HIV PR (12X FIV PR). The chimeric PR was crystallized in complex with the broad-based inhibitor TL-3, which inhibits wild type FIV and HIV PRs, as well as 12X FIV PR and several drug-resistant HIV mutants 1234. Biochemical analyses have demonstrated that TL-3 inhibits these PRs in the order HIV PR > 12X FIV PR > FIV PR, with Ki values of 1.5 nM, 10 nM, and 41 nM, respectively 234. Comparison of the crystal structures of the TL-3 complexes of 12X FIV and wild-typeFIV PR revealed theformation of additinal van der Waals interactions between the enzyme inhibitor in the mutant PR. The 12X FIV PR retained the hydrogen bonding interactions between residues in the flap regions and active site involving the enzyme and the TL-3 inhibitor in comparison to both FIV PR and HIV PR. However, the flap regions of the 12X FIV PR more closely resemble those of HIV PR, having gained several stabilizing intra-flap interactions not present in wild type FIV PR. These findings offer a structural explanation for the observed inhibitor/substrate binding properties of the chimeric PR.

Indexed as

AnimalsAspartic Acid EndopeptidasesBinding SitesCatsCrystallizationCrystallography, X-RayDimerizationHIV-1HIV ProteaseHumansImmunodeficiency Virus, FelineModels, MolecularMutationProtease InhibitorsProtein ConformationRecombinant Fusion ProteinsAspartic Acid EndopeptidasesFIV proteaseHIV ProteaseProtease InhibitorsRecombinant Fusion Proteins

Identifiers

PMID17212810
PMCPMC1781954
OpenAlexW1595438783

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.