ArticlePlant molecular biology2007
Transcriptional profiling of wheat caryopsis development using cDNA microarrays.
Article in Plant molecular biology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.
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Who cites it
42 citing papers in PubMed, 89 citations in OpenAlex.
- Integrated transcriptomic and metabolomic analyses revealed the regulatory mechanism of sulfur application in grain yield and protein content in wheat (Frontiers in plant science · 2022Article
- RNASeq analysis of drought-stressed guayule reveals the role of gene transcription for modulating rubber, resin, and carbohydrate synthesis.Scientific reports · 2021Article
- Article
- Spatial distribution of proteins and metabolites in developing wheat grain and their differential regulatory response during the grain filling process.The Plant journal : for cell and molecular biology · 2021Article
- Probing early wheat grain development via transcriptomic and proteomic approaches.Functional & integrative genomics · 2020Article
- Transcriptomic and evolutionary analysis of the mechanisms by which P. argentatum, a rubber producing perennial, responds to drought.BMC plant biology · 2019Article
- Global transcriptome analysis uncovers the gene co-expression regulation network and key genes involved in grain development of wheat (Triticum aestivum L.).Functional & integrative genomics · 2019Article
- A reductionist approach to dissecting grain weight and yield in wheat.Journal of integrative plant biology · 2019Review
- "Expression of genes encoding protein disulfide isomerase (PDI) in cultivars and lines of common wheat with different baking quality of flour".BMC plant biology · 2018Article
- Comparative analysis of transcriptome in two wheat genotypes with contrasting levels of drought tolerance.Protoplasma · 2018Article
- Ubiquitin-related genes are differentially expressed in isogenic lines contrasting for pericarp cell size and grain weight in hexaploid wheat.BMC plant biology · 2018Article
- The transcriptome of the developing grain: a resource for understanding seed development and the molecular control of the functional and nutritional properties of wheat.BMC genomics · 2017Article
- Pattern of Protein Expression in Developing Wheat Grains Identified through Proteomic Analysis.Frontiers in plant science · 2017Article
- Article
- Carpel size, grain filling, and morphology determine individual grain weight in wheat.Journal of experimental botany · 2015Article
- Hormonal Regulation and Expression Profiles of Wheat Genes Involved during Phytic Acid Biosynthesis Pathway.Plants (Basel, Switzerland) · 2015Article
- Fructan biosynthesis and degradation as part of plant metabolism controlling sugar fluxes during durum wheat kernel maturation.Frontiers in plant science · 2015Article
- Genetic and molecular bases of yield-associated traits: a translational biology approach between rice and wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2014Review
- Article
- Transcriptome analysis during seed germination of elite Chinese bread wheat cultivar Jimai 20.BMC plant biology · 2014Article
Corrections and comments
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Authors and funding
6 authors at 2 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The expression of 7,835 genes in developing wheat caryopses was analyzed using cDNA arrays. Using a mixed model analysis of variance (ANOVA) method, 29% (2,237) of the genes on the array were identified to be differentially expressed at the 6 different time-points examined, which covers the developmental stages from coenocytic endosperm to physiological maturity. Comparison of genes differentially expressed between two time-points revealed a dynamic transcript accumulation profile with major re-programming events that occur at 3-7, 7-14 and 21-28 DPA. A k-means clustering algorithm grouped the differentially expressed genes into 10 clusters, revealing co-expression of genes involved in the same pathway such as carbohydrate and protein synthesis or preparation for desiccation. Functional annotation of genes that show peak expression at specific time-points correlated with the developmental events associated with the respective stages. Results provide information on the temporal expression during caryopsis development for a significant number of differentially expressed genes with unknown function.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.