Evidence map›Paper›PMID 17209062›Full record

ArticleApplied and environmental microbiology2007

Characterization of ISXax1, a novel insertion sequence restricted to Xanthomonas axonopodis pv. phaseoli (variants fuscans and non-fuscans) and Xanthomonas axonopodis pv. vesicatoria.

Seyed Mehdi Alavi, Stéphane Poussier, Charles Manceau

Open access · greenAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.3field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

  1. Scientific Opinion on the pest categorisation ofEFSA journal. European Food Safety Authority · 2014
    Article
  2. Article
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  4. Aflp analysis of xanthomonas axonopodis and x. Arboricola strains used in xanthan production studies reveal high levels of polymorphism.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2010
    Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Seyed Mehdi AlaviUMR PaVé, centre INRA, 42 rue Georges Morel, 49071 Beaucouzé Cedex 1, France.
Stéphane Poussier
Charles Manceau

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

ISXax1 is a novel insertion sequence belonging to the IS256 and Mutator families. Dot blot, Southern blot, and PCR analyses revealed that ISXax1 is restricted to Xanthomonas axonopodis pv. phaseoli (variants fuscans and non-fuscans) and X. axonopodis pv. vesicatoria strains. Directed AFLP also showed that a high degree of polymorphism is associated with ISXax1 insertion in these strains.

Indexed as

Amino Acid SequenceDNA, BacterialDNA Transposable ElementsFabaceaeMolecular Sequence DataSequence Analysis, DNAXanthomonas axonopodisXanthomonas vesicatoriaDNA, BacterialDNA Transposable Elements

Identifiers

PMID17209062
PMCPMC1828756
OpenAlexW2159036922

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.