Evidence map›Paper›PMID 17205119›Full record

ArticlePloS one2006

Detection of conjugation related type four secretion machinery in Aeromonas culicicola.

Ashraf Yusuf Rangrez, Kannayakanahalli Maheshwarappa Dayananda, Santosh Atanur, Rajendra Joshi, Milind S Patole, Yogesh S Shouche

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.5field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 18 citations in OpenAlex.

  1. Life (Basel, Switzerland) · 2022
    Article
  2. Article
  3. Article
  4. The Social Life ofFrontiers in microbiology · 2017
    Review
  5. Article
  6. Article
  7. Article
  8. Frequency of resistance and susceptible bacteria isolated from houseflies.Iranian journal of arthropod-borne diseases · 2010
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Ashraf Yusuf RangrezMolecular Biology Unit, National Centre for Cell Science, Pune University Campus, Pune, Maharashtra, India.
Kannayakanahalli Maheshwarappa Dayananda
Santosh Atanur
Rajendra Joshi
Milind S Patole
Yogesh S Shouche
National Centre for Cell Science · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundAeromonas sp. can now be considered relatively common enteropathogens due to the increase of diseases in humans. Aeromonas culicicola is a gram negative rod-shaped bacterium isolated for the first time from the mosquito mid-gut, but subsequently detected in other insects and waters also. Our previous study discovered that A. culicicola harbors three plasmids, which we designated as pAc3249A, pAc3249B and pAc3249C. We investigated and report here the existence and genetic organization of a Conjugal Type IV Secretion System (TFSS) in pAc3249A. METHODOLOGY/PRINCIPLE FINDING: The complete operon is 11,061 bp in length and has G+C content of 47.20% code for 12 ORFs. The gene order and orientation were similar to those found in other bacteria with some differences. We have designated this system as AcTra for Aeromonas culicicola transfer system. BLAST results of ORFs and phylogenetic analysis showed significant similarity towards the respective proteins of the IncI2 plasmid R721 of E. coli. Other bioinformatics studies have been performed to predict conserved motifs/domains, signal peptides, transmembrane helices, etc. of the ORFs. CONCLUSIONS/SIGNIFICANCE: BLAST results of ORFs and phylogenetic analysis showed significant similarity towards the respective proteins of the IncI2 plasmid R721 of E. coli.

Indexed as

Conjugation, GeneticAeromonasAnimalsBacterial ProteinsBase CompositionEscherichia coliFimbriae ProteinsGram-Negative Bacterial InfectionsHumansNucleoside-TriphosphataseOpen Reading FramesOperonPhylogenyPlasmidsSpecies SpecificityBacterial ProteinsFimbriae ProteinsNucleoside-Triphosphatase

Identifiers

PMID17205119
PMCPMC1762418
OpenAlexW2142010480

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.