Evidence map›Paper›PMID 17203978›Full record

ArticleJournal of proteome research2007

Protein expression in a Drosophila model of Parkinson's disease.

Zhiyin Xun, Renã A Sowell, Thomas C Kaufman, David E Clemmer

Abstract read
In one paragraph

Article in Journal of proteome research, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. Article
  2. Parkinson's disease · 2021
    Article
  3. Article
  4. Proteome-Scale Mapping of Perturbed Proteostasis in Living Cells.Cold Spring Harbor perspectives in biology · 2020
    Review
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Chemical measurements in Drosophila.Trends in analytical chemistry : TRAC · 2009
    Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Zhiyin XunDepartment of Chemistry, Indiana University, Bloomington, Indiana 47405, USA.
Renã A Sowell
Thomas C Kaufman
David E Clemmer

Funding

New proteome technologies: mapping adult D. melanogasterR01AG024547 · NIA · TRUSTEES OF INDIANA UNIVERSITY · PI CLEMMER, DAVID E. · 2005 to 2008
$955k
NIA NIH HHS R01 AG024547NIA NIH HHS R01-AG-024547
6 · The paper itself

Abstract

Liquid chromatographies coupled to mass spectrometry and database analysis techniques are used to carry out a large-scale proteome characterization for a Drosophila model of Parkinson's disease. Semiquantitative analysis is performed on A30P alpha-synuclein expressing transgenic Drosophila and a control lacking the gene at presymptomatic, early, and advanced disease stages. Changes in gene expression at the level of the proteome are compared with changes reported from published transcriptome measurements. A summary of the comparison indicates that approximately 44% of transcripts that show changes can also be observed as proteins. However, the patterns of change in protein expression vary substantially compared with the patterns of change observed for corresponding transcripts. In addition, the expression changes of many genes are observed for only transcripts or proteins. Proteome measurements provide evidence for dysregulation of a group of proteins associated with the actin cytoskeleton and mitochondrion at presymptomatic and early disease stages that may presage the development of later symptoms. Overall, the proteome measurements provide a view of gene expression that is highly complementary to the insights obtained from the transcriptome.

Indexed as

Gene Expression Regulationalpha-SynucleinAnimalsAnimals, Genetically ModifiedCell Physiological PhenomenaChromatography, LiquidDisease Models, AnimalDrosophila melanogasterGene Expression ProfilingModels, BiologicalParkinson DiseasePeptidesProteomeProteomicsRNA, Messengeralpha-SynucleinPeptidesProteomeRNA, Messenger

Identifiers

PMID17203978
PMCPMC2597372

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.