Evidence map›Paper›PMID 17202409›Full record

ArticleMolecular biology of the cell2007

Function of the Caenorhabditis elegans ABC transporter PGP-2 in the biogenesis of a lysosome-related fat storage organelle.

Lena K Schroeder, Susan Kremer, Maxwell J Kramer, Erin Currie, Elizabeth Kwan, Jennifer L Watts, Andrea L Lawrenson, Greg J Hermann

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 85 papers.

0numbers the graph read from it
0cells of the map it votes in
85citing papers in PubMed
14.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

85 citing papers in PubMed, 120 citations in OpenAlex.

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25 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Lena K SchroederDepartment of Biology, Lewis and Clark College, Portland, OR 97219, USA.
Susan Kremer
Maxwell J Kramer
Erin Currie
Elizabeth Kwan
Jennifer L Watts
Andrea L Lawrenson
Greg J Hermann
Lewis & Clark College · USWashington State University · US

Funding

Genetic and Genomic Investigations of Fat Storage and Metabolism in C. elegansR01DK074114 · NIDDK · WASHINGTON STATE UNIVERSITY · PI WATTS, JENNIFER L · 2006 to 2013
$2.4M
NIDDK NIH HHS R01 DK074114NIDDK NIH HHS R01-DK074114
6 · The paper itself

Abstract

Caenorhabditis elegans gut granules are intestine specific lysosome-related organelles with birefringent and autofluorescent contents. We identified pgp-2, which encodes an ABC transporter, in screens for genes required for the proper formation of gut granules. pgp-2(-) embryos mislocalize birefringent material into the intestinal lumen and are lacking in acidified intestinal V-ATPase-containing compartments. Adults without pgp-2(+) function similarly lack organelles with gut granule characteristics. These cellular phenotypes indicate that pgp-2(-) animals are defective in gut granule biogenesis. Double mutant analysis suggests that pgp-2(+) functions in parallel with the AP-3 adaptor complex during gut granule formation. We find that pgp-2 is expressed in the intestine where it functions in gut granule biogenesis and that PGP-2 localizes to the gut granule membrane. These results support a direct role of an ABC transporter in regulating lysosome biogenesis. Previously, pgp-2(+) activity has been shown to be necessary for the accumulation of Nile Red-stained fat in C. elegans. We show that gut granules are sites of fat storage in C. elegans embryos and adults. Notably, levels of triacylglycerides are relatively normal in animals defective in the formation of gut granules. Our results provide an explanation for the loss of Nile Red-stained fat in pgp-2(-) animals as well as insight into the specialized function of this lysosome-related organelle.

Indexed as

Lipid MetabolismAdaptor Protein Complex 3Adenosine TriphosphatasesAnimalsATP-Binding Cassette TransportersATP Binding Cassette Transporter, Subfamily BBirefringenceCaenorhabditis elegansCaenorhabditis elegans ProteinsCytoplasmic GranulesEmbryo, NonmammalianEndocytosisExonsGastrointestinal TractIntracellular MembranesLysosomesAdaptor Protein Complex 3Adenosine TriphosphatasesATP-Binding Cassette TransportersATP Binding Cassette Transporter, Subfamily BCaenorhabditis elegans ProteinsPGP-2 protein, C elegans

Identifiers

PMID17202409
PMCPMC1805080
OpenAlexW2155328400

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.