Evidence map›Paper›PMID 17202270›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2007

Structural insights into the p97-Ufd1-Npl4 complex.

Valerie E Pye, Fabienne Beuron, Catherine A Keetch, Ciaran McKeown, Carol V Robinson, Hemmo H Meyer, Xiaodong Zhang, Paul S Freemont

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 95 citations in OpenAlex.

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  8. The Cryo-EM Effect: Structural Biology of Neurodegenerative Disease Proteostasis Factors.Journal of neuropathology and experimental neurology · 2021
    Review
  9. Review
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  11. Article
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  14. Article
  15. Interaction between the AAAThe Journal of biological chemistry · 2017
    Article
  16. Article
  17. Article
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  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Valerie E PyeDivision of Molecular Biosciences, Faculty of Natural Sciences, Imperial College London, London SW7 2AZ, United Kingdom.
Fabienne Beuron
Catherine A Keetch
Ciaran McKeown
Carol V Robinson
Hemmo H Meyer
Xiaodong Zhang
Paul S Freemont
Imperial College London · GBUniversity of Cambridge · GBBoard of the Swiss Federal Institutes of Technology · CH

Funding

STEM Mass Mapping &Heavy Atom Labeling of BiomoleculesP41EB002181 · NIBIB · BROOKHAVEN SCIENCE ASSOC-BROOKHAVEN LAB · PI WALL, JOSEPH S · 2003 to 2006
$3.3M
NIBIB NIH HHS 5 P41 EB2181NIBIB NIH HHS P41 EB002181Wellcome Trust
6 · The paper itself

Abstract

p97/VCP (Cdc48 in yeast) is an essential and abundant member of the AAA+ family of ATPases and is involved in a number of diverse cellular pathways through interactions with different adaptor proteins. The two most characterized adaptors for p97 are p47 and the Ufd1 (ubiquitin fusion degradation 1)-Npl4 (nuclear protein localization 4) complex. p47 directs p97 to membrane fusion events and has been shown to be involved in protein degradation. The Ufd1-Npl4 complex directs p97 to an essential role in endoplasmic reticulum-associated degradation and an important role in mitotic spindle disassembly postmitosis. Here we describe the structural features of the Ufd1-Npl4 complex and its interaction with p97 with the aid of EM and other biophysical techniques. The Ufd1-Npl4 heterodimer has an elongated bilobed structure that is approximately 80 x 30 A in dimension. One Ufd1-Npl4 heterodimer is shown to interact with one p97 hexamer to form the p97-Ufd1-Npl4 complex. The Ufd1-Npl4 heterodimer emanates from one region on the periphery of the N-D1 plane of the p97 hexamer. Intriguingly, the p97-p47 and the p97-Ufd1-Npl4 complexes are significantly different in stoichiometry, symmetry, and quaternary arrangement, reflecting their specific actions and their ability to interact with additional cofactors that cooperate with p97 in diverse cellular pathways.

Indexed as

Adenosine TriphosphatasesDimerizationEndoplasmic ReticulumMicroscopy, ElectronModels, MolecularMultiprotein ComplexesNuclear Pore Complex ProteinsNuclear ProteinsNucleocytoplasmic Transport ProteinsProtein BindingProtein Structure, QuaternaryRecombinant ProteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsUbiquitinVesicular Transport ProteinsAdenosine TriphosphatasesMultiprotein ComplexesNPL4 protein, S cerevisiaeNuclear Pore Complex ProteinsNuclear ProteinsNucleocytoplasmic Transport Proteinsp97 ATPaseRecombinant ProteinsSaccharomyces cerevisiae ProteinsUbiquitinUFD1 protein, S cerevisiaeVesicular Transport Proteins

Identifiers

PMID17202270
PMCPMC1761865
OpenAlexW2142761084

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.