Evidence map›Paper›PMID 17202224›Full record

ArticleJournal of virology2007

Evolution of CXCR4-using human immunodeficiency virus type 1 SF162 is associated with two unique envelope mutations.

Yana Kiselyeva, Rebecca Nedellec, Alejandra Ramos, Cristina Pastore, Leonid B Margolis, Donald E Mosier

Abstract read
In one paragraph

Article in Journal of virology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.0field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Article
  3. Coreceptor use in nonhuman primate models of HIV infection.Journal of translational medicine · 2011
    Review
  4. Article
  5. Article
  6. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Yana KiselyevaLaboratory of Molecular and Cellular Biophysics, National Institute of Child Health and Human Development/NIH, 10 Center Drive, Bethesda, MD 20892, USA.
Rebecca Nedellec
Alejandra Ramos
Cristina Pastore
Leonid B Margolis
Donald E Mosier
Scripps Research Institute · USEunice Kennedy Shriver National Institute of Child Health and Human Development · US

Funding

HIV CORECEPTOR SWITCHINGR01AI052778 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI MOSIER, DONALD E · 2003 to 2010
$3.8M
HIV Coreceptor SwitchingR56AI052778 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI MOSIER, DONALD E · 2011 to 2011
$474k
Intramural NIH HHSNIAID NIH HHS AI 52778NIAID NIH HHS R01 AI052778NIAID NIH HHS R56 AI052778
6 · The paper itself

Abstract

CCR5-using human immunodeficiency virus type 1 (HIV-1) isolates typically gain CXCR4 use via multiple mutations in V3 and often V1/V2 regions of envelope, and patterns of mutations are distinct for each isolate. Here, we report that multiple CXCR4-using variants of a parental CCR5-using HIV-1 isolate, SF162, obtained by either target cell selection or CCR5 inhibition have a common mutation pattern characterized by the same two V3 mutations and that these mutations preexisted in some of the SF162 stocks. These results imply that SF162 has a single pathway for acquiring CXCR4 use and that prolonged culture is sufficient to select for R5X4 variants.

Indexed as

Evolution, MolecularCells, CulturedHIV-1HumansMutationReceptors, CXCR4Sensitivity and SpecificityViral Envelope ProteinsVirus ReplicationReceptors, CXCR4Viral Envelope Proteins

Identifiers

PMID17202224
PMCPMC1866070
OpenAlexW2155068656

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.