Evidence map›Paper›PMID 17202173›Full record

ArticleNucleic acids research2007

MIPSPlantsDB--plant database resource for integrative and comparative plant genome research.

Manuel Spannagl, Octave Noubibou, Dirk Haase, Li Yang, Heidrun Gundlach, Tobias Hindemitt, Kathrin Klee, Georg Haberer, Heiko Schoof, Klaus F X Mayer

Abstract read
In one paragraph

Article in Nucleic acids research, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed.

  1. Article
  2. Article
  3. Integration of Lupinus angustifolius L. (narrow-leafed lupin) genome maps and comparative mapping within legumes.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2016
    Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. GnpIS: an information system to integrate genetic and genomic data from plants and fungi.Database : the journal of biological databases and curation · 2013
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Efficient plant gene identification based on interspecies mapping of full-length cDNAs.DNA research : an international journal for rapid publication of reports on genes and genomes · 2010
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Manuel SpannaglMIPS, Institute for Bioinformatics, GSF Research Center for Environment and Health, Ingolstädter Landstr. 1 85764 Neuherberg, Germany.
Octave Noubibou
Dirk Haase
Li Yang
Heidrun Gundlach
Tobias Hindemitt
Kathrin Klee
Georg Haberer
Heiko Schoof
Klaus F X Mayer

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genome-oriented plant research delivers rapidly increasing amount of plant genome data. Comprehensive and structured information resources are required to structure and communicate genome and associated analytical data for model organisms as well as for crops. The increase in available plant genomic data enables powerful comparative analysis and integrative approaches. PlantsDB aims to provide data and information resources for individual plant species and in addition to build a platform for integrative and comparative plant genome research. PlantsDB is constituted from genome databases for Arabidopsis, Medicago, Lotus, rice, maize and tomato. Complementary data resources for cis elements, repetive elements and extensive cross-species comparisons are implemented. The PlantsDB portal can be reached at http://mips.gsf.de/projects/plants.

Indexed as

Databases, Nucleic AcidGenome, PlantArabidopsisBase SequenceConserved SequenceDNA, PlantFabaceaeGenomicsInternetPlant ProteinsPoaceaePromoter Regions, GeneticRepetitive Sequences, Nucleic AcidSequence Homology, Amino AcidSoftwareSolanum lycopersicumDNA, PlantPlant Proteins

Identifiers

PMID17202173
PMCPMC1899105

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.