Evidence map›Paper›PMID 17198425›Full record

ArticleInorganic chemistry2007

Assignment of the ferriheme resonances of the high-spin forms of nitrophorins 1 and 4 by 1H NMR spectroscopy: comparison to structural data obtained from X-ray crystallography.

Tatiana Kh Shokhireva, Kevin M Smith, Robert E Berry, Nikolai V Shokhirev, Celia A Balfour, Hongjun Zhang, F Ann Walker

Abstract readComparative Study
In one paragraph

Article in Inorganic chemistry, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. NMR investigations of nitrophorin 2 belt side chain effects on heme orientation and seating of native N-terminus NP2 and NP2(D1A).Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2014
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  7. 1H and 13C NMR spectroscopic studies of the ferriheme resonances of three low-spin complexes of wild-type nitrophorin 2 and nitrophorin 2(V24E) as a function of pH.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2009
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Tatiana Kh ShokhirevaDepartment of Chemistry, The University of Arizona, Tucson, Arizona 85721-0041, USA.
Kevin M Smith
Robert E Berry
Nikolai V Shokhirev
Celia A Balfour
Hongjun Zhang
F Ann Walker

Funding

NITRIC OXIDE INTERACTION WITH INSECT NITROPHORINSR01HL054826 · NHLBI · UNIVERSITY OF ARIZONA · PI WALKER, FRANCES ANN · 1995 to 2012
$3.5M
MODELS OF THE CYTOCHROMESR01DK031038 · NIDDK · UNIVERSITY OF ARIZONA · PI WALKER, FRANCES ANN · 1986 to 2005
$1.6M
SYNTHESES OF HEMES FOR PROTEIN STUDIESR01EB002064 · NIBIB · LOUISIANA STATE UNIV A&M COL BATON ROUGE · PI SMITH, KEVIN M · 2003 to 2003
$368k
Models of the CytochromesR56DK031038 · NIDDK · UNIVERSITY OF ARIZONA · PI WALKER, FRANCES ANN · 2006 to 2006
$99k
NHLBI NIH HHS HL54826NHLBI NIH HHS R01 HL054826NIBIB NIH HHS EB002064NIBIB NIH HHS R01 EB002064NIDDK NIH HHS DK31038NIDDK NIH HHS R01 DK031038NIDDK NIH HHS R56 DK031038
6 · The paper itself

Abstract

In this work, we report the assignment of the majority of the ferriheme resonances of high-spin nitrophorins (NPs) 1 and 4 and compare them to those of NP2, published previously. It is found that the structures of the ferriheme complexes of NP1 and NP4, in terms of the orientation of the histidine imidazole ligand, can be described with good accuracy by NMR techniques and that the angle plot proposed previously for the high-spin form of the NPs (Shokhireva, T. Kh.; Shokhirev, N. V.; Walker, F. A. Biochemistry 2003, 42, 679-693) describes the angle of the effective nodal plane of the axial histidine imidazole in solution. There is an equilibrium between the two heme orientations (A and B), which depends on the heme cavity shape, which can be altered by mutation of amino acids with side chains (phenyl vs tyrosyl) near the potential position where a heme vinyl group would be in one of the isomers. The A:B ratio can be much more accurately measured by NMR spectroscopy than by X-ray crystallography.

Indexed as

Crystallography, X-RayHemeproteinsHeminMacromolecular SubstancesMagnetic Resonance SpectroscopySalivary Proteins and PeptidesHemeproteinsHeminMacromolecular SubstancesnitrophorinSalivary Proteins and Peptides

Identifiers

PMID17198425
PMCPMC2518634

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.