Evidence map›Paper›PMID 17197424›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2007

Neutralization of a single arginine residue gates open a two-pore domain, alkali-activated K+ channel.

María Isabel Niemeyer, Fernando D González-Nilo, Leandro Zúñiga, Wendy González, L Pablo Cid, Francisco V Sepúlveda

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed.

  1. Mechanisms of intracellular pH gating and local anesthetic inhibition of the two-pore domain KProceedings of the National Academy of Sciences of the United States of America · 2026
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  11. Endogenous pannexin1 channels form functional intercellular cell-cell channels with characteristic voltage-dependent properties.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  12. Review
  13. Comparison of KHandbook of experimental pharmacology · 2021
    Article
  14. The Pharmacology of Two-Pore Domain Potassium Channels.Handbook of experimental pharmacology · 2021
    Article
  15. Article
  16. Article
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  19. Cardiovascular pharmacology of KNaunyn-Schmiedeberg's archives of pharmacology · 2018
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

María Isabel NiemeyerCentro de Estudios Científicos, Avenida Arturo Prat 514, Valdivia 509-9100, Chile. miniemeyer@cecs.cl
Fernando D González-Nilo
Leandro Zúñiga
Wendy González
L Pablo Cid
Francisco V Sepúlveda

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Potassium channels share a common selectivity filter that determines the conduction characteristics of the pore. Diversity in K+ channels is given by how they are gated open. TASK-2, TALK-1, and TALK-2 are two-pore region (2P) KCNK K+ channels gated open by extracellular alkalinization. We have explored the mechanism for this alkalinization-dependent gating using molecular simulation and site-directed mutagenesis followed by functional assay. We show that the side chain of a single arginine residue (R224) near the pore senses pH in TASK-2 with an unusual pKa of 8.0, a shift likely due to its hydrophobic environment. R224 would block the channel through an electrostatic effect on the pore, a situation relieved by its deprotonation by alkalinization. A lysine residue in TALK-2 fulfills the same role but with a largely unchanged pKa, which correlates with an environment that stabilizes its positive charge. In addition to suggesting unified alkaline pH-gating mechanisms within the TALK subfamily of channels, our results illustrate in a physiological context the principle that hydrophobic environment can drastically modulate the pKa of charged amino acids within a protein.

Indexed as

Amino Acid SequenceAnimalsArginineHumansHydrogen-Ion ConcentrationIn Vitro TechniquesIon Channel GatingMiceModels, MolecularMolecular Sequence DataMutagenesis, Site-DirectedPotassium Channels, Tandem Pore DomainProtein ConformationRecombinant ProteinsSequence Homology, Amino AcidArginineKCNK17 protein, humanKcnk5 protein, mousePotassium Channels, Tandem Pore DomainRecombinant Proteins

Identifiers

PMID17197424
PMCPMC1766441

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.